ID A0A0Q4QNV0_9GAMM Unreviewed; 458 AA.
AC A0A0Q4QNV0;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=ATP-dependent RNA helicase {ECO:0000313|EMBL:KQN98161.1};
GN ORFNames=ASF01_09870 {ECO:0000313|EMBL:KQN98161.1};
OS Stenotrophomonas sp. Leaf70.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC Xanthomonadaceae; Stenotrophomonas.
OX NCBI_TaxID=1736233 {ECO:0000313|EMBL:KQN98161.1, ECO:0000313|Proteomes:UP000051583};
RN [1] {ECO:0000313|EMBL:KQN98161.1, ECO:0000313|Proteomes:UP000051583}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf70 {ECO:0000313|EMBL:KQN98161.1,
RC ECO:0000313|Proteomes:UP000051583};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQN98161.1, ECO:0000313|Proteomes:UP000051583}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf70 {ECO:0000313|EMBL:KQN98161.1,
RC ECO:0000313|Proteomes:UP000051583};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the DEAD box helicase family.
CC {ECO:0000256|RuleBase:RU000492}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQN98161.1}.
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DR EMBL; LMLT01000006; KQN98161.1; -; Genomic_DNA.
DR RefSeq; WP_055769314.1; NZ_LMLT01000006.1.
DR AlphaFoldDB; A0A0Q4QNV0; -.
DR Proteomes; UP000051583; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR CDD; cd00268; DEADc; 1.
DR CDD; cd18787; SF2_C_DEAD; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR005580; DbpA/CsdA_RNA-bd_dom.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000629; RNA-helicase_DEAD-box_CS.
DR InterPro; IPR014014; RNA_helicase_DEAD_Q_motif.
DR PANTHER; PTHR47959:SF19; ATP-DEPENDENT RNA HELICASE DBPA; 1.
DR PANTHER; PTHR47959; ATP-DEPENDENT RNA HELICASE RHLE-RELATED; 1.
DR Pfam; PF03880; DbpA; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00039; DEAD_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
DR PROSITE; PS51195; Q_MOTIF; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU000492};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000256|RuleBase:RU000492};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801, ECO:0000256|RuleBase:RU000492};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU000492}.
FT DOMAIN 2..30
FT /note="DEAD-box RNA helicase Q"
FT /evidence="ECO:0000259|PROSITE:PS51195"
FT DOMAIN 33..205
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 215..377
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT MOTIF 2..30
FT /note="Q motif"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00552"
SQ SEQUENCE 458 AA; 49433 MW; F6872AA61884E500 CRC64;
MTDFSSLPLI PALAPGIDAL GYTAMTPVQA LSLPPILEGR DVIAQAPTGS GKTAAFGLGL
LNRLDPATIR TQALVLCPTR ELADQVGKQL RKLATGIPNL KLLVLTGGVP LGPQLASLEA
HDPQVVVGTP GRVQELARKR ALNLGQVRTF VLDEADRMLD MGFEEPIREI AGRTHKERQS
LLFSATFPDE IRELARALLN EPVEVTIDGQ QEAPAIKHLF FEVESAHRQK ALAGLLLKYT
PESAVVFCNT RKDVDEVANS LRQFGFSALA LHGDMEQRDR DEVLLQFSNR SCNVLVASDV
AARGLDVEDL AAVVNYEMPS DLDTYRHRVG RTARAGRSGL ALSLVAGRER HRADALEADQ
GSALDWQKTP LATARPAQLP QAAMTTLRID GGKTDKLRAG DILGALTGDA GLSAKAIGKI
DIFPTRSYVA IAHEHAGKAV ARLEAGKIKG KRFRVRKM
//
