ID A0A0Q5P0W9_9BURK Unreviewed; 734 AA.
AC A0A0Q5P0W9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=Protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO {ECO:0000313|EMBL:KQR78711.1};
GN ORFNames=ASG35_09985 {ECO:0000313|EMBL:KQR78711.1};
OS Burkholderia sp. Leaf177.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Burkholderia.
OX NCBI_TaxID=1736287 {ECO:0000313|EMBL:KQR78711.1, ECO:0000313|Proteomes:UP000051826};
RN [1] {ECO:0000313|EMBL:KQR78711.1, ECO:0000313|Proteomes:UP000051826}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf177 {ECO:0000313|EMBL:KQR78711.1,
RC ECO:0000313|Proteomes:UP000051826};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQR78711.1, ECO:0000313|Proteomes:UP000051826}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf177 {ECO:0000313|EMBL:KQR78711.1,
RC ECO:0000313|Proteomes:UP000051826};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQR78711.1}.
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DR EMBL; LMPF01000021; KQR78711.1; -; Genomic_DNA.
DR RefSeq; WP_056360004.1; NZ_LMPF01000021.1.
DR AlphaFoldDB; A0A0Q5P0W9; -.
DR OrthoDB; 9761274at2; -.
DR Proteomes; UP000051826; Unassembled WGS sequence.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR Gene3D; 3.30.1330.230; -; 1.
DR Gene3D; 3.30.300.20; -; 1.
DR InterPro; IPR015946; KH_dom-like_a/b.
DR InterPro; IPR003718; OsmC/Ohr_fam.
DR InterPro; IPR036102; OsmC/Ohrsf.
DR InterPro; IPR003776; YcaO-like_dom.
DR InterPro; IPR041080; YcaO_C.
DR InterPro; IPR019938; YcaO_dom_prot.
DR NCBIfam; TIGR03549; OsmC domain/YcaO domain-containing protein; 1.
DR NCBIfam; TIGR00702; YcaO-type kinase domain; 1.
DR NCBIfam; NF040716; YcaO_for_S12; 1.
DR PANTHER; PTHR39624:SF2; OSMC FAMILY PROTEIN; 1.
DR PANTHER; PTHR39624; PROTEIN INVOLVED IN RIMO-MEDIATED BETA-METHYLTHIOLATION OF RIBOSOMAL PROTEIN S12 YCAO; 1.
DR Pfam; PF02566; OsmC; 1.
DR Pfam; PF02624; YcaO; 1.
DR Pfam; PF18381; YcaO_C; 1.
DR SUPFAM; SSF82784; OsmC-like; 1.
DR PROSITE; PS51664; YCAO; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000051826};
KW Ribonucleoprotein {ECO:0000313|EMBL:KQR78711.1};
KW Ribosomal protein {ECO:0000313|EMBL:KQR78711.1}.
FT DOMAIN 206..594
FT /note="YcaO"
FT /evidence="ECO:0000259|PROSITE:PS51664"
SQ SEQUENCE 734 AA; 81639 MW; 479D2BAD0E6B71CD CRC64;
MEIKVNFLDK LRLEAKFDDF TVIADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKLYCV
TRNISTENIR LSQNNIVDPE NRYQQIFKIQ VELPADISAK DRQGILRSID RCTVKKVVQA
GPEFVIEEVE NLDADAQSLL TLKPASSAST YIAGKDLPLE QTIANMSGTL AALGIKIEIA
SWRNLVPNVW SLHIRDAHSP MCFTNGKGAT KESALASALG EYIERTNCNH FYAGAFWGEE
IANAAFVHYP DERWFKPGRK GALPAEILDD YCLQIYNPDN ELRSSHLIDT NSGNTQRGIC
SLPYVRQSDG EVVYFPSNLI ENLYVSNGMS AGNTLAEAQV QCLSEIFERA VKREILEGEI
ALPDVPQEVL AKYPGIQAGI QGLEEQGFPV LVKDASLGGV YPVMCVTLMN PRTGGVFASF
GAHPSLEVAL ERSLTELLQG RSFEGLNELP RPTFASEAVT EPNNFVEHFI DSSGIVSWRF
FSAKADFDFV EWDFSGHGEN SNADEAATLF GILEDIGKEA YMAVYDQLGA VACRILVPGY
SEIYPVEDLV WDNTNKALLF RADVLNLHRL DNAALAGLLE RLDNNELDEH SDIATLIGIE
FDENTEWGQL TVLELKLLIH LALKQFDEAQ ELVGAFLQYN DNTVERGLFY QALNVVLEVL
LDDDLELDDY VFNFRRMFGN ARMDAVMGSV DGSVRFHGLT PTSMRLEGLD RHHRLIDSYR
KLHKARANAA AVAH
//
