ID A0A0Q5Q1C1_9SPHN Unreviewed; 225 AA.
AC A0A0Q5Q1C1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=pre-crRNA processing endonuclease {ECO:0000256|PIRNR:PIRNR029950};
DE EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR029950};
GN ORFNames=ASG07_03525 {ECO:0000313|EMBL:KQR87940.1};
OS Sphingomonas sp. Leaf343.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1736345 {ECO:0000313|EMBL:KQR87940.1, ECO:0000313|Proteomes:UP000051323};
RN [1] {ECO:0000313|EMBL:KQR87940.1, ECO:0000313|Proteomes:UP000051323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf343 {ECO:0000313|EMBL:KQR87940.1,
RC ECO:0000313|Proteomes:UP000051323};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQR87940.1, ECO:0000313|Proteomes:UP000051323}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf343 {ECO:0000313|EMBL:KQR87940.1,
RC ECO:0000313|Proteomes:UP000051323};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: CRISPR (clustered regularly interspaced short palindromic
CC repeat) is an adaptive immune system that provides protection against
CC mobile genetic elements (viruses, transposable elements and conjugative
CC plasmids). CRISPR clusters contain spacers, sequences complementary to
CC antecedent mobile elements, and target invading nucleic acids. CRISPR
CC clusters are transcribed and processed into CRISPR RNA (crRNA).
CC {ECO:0000256|PIRNR:PIRNR029950}.
CC -!- SIMILARITY: Belongs to the CRISPR-associated protein Cas5 family.
CC Subtype I-C/Dvulg subfamily. {ECO:0000256|PIRNR:PIRNR029950}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQR87940.1}.
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DR EMBL; LMPG01000001; KQR87940.1; -; Genomic_DNA.
DR RefSeq; WP_055842202.1; NZ_LMPG01000001.1.
DR AlphaFoldDB; A0A0Q5Q1C1; -.
DR STRING; 1736345.ASG07_03525; -.
DR OrthoDB; 5621871at2; -.
DR Proteomes; UP000051323; Unassembled WGS sequence.
DR GO; GO:0004519; F:endonuclease activity; IEA:UniProtKB-UniRule.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-UniRule.
DR GO; GO:0043571; P:maintenance of CRISPR repeat elements; IEA:UniProtKB-UniRule.
DR CDD; cd09752; Cas5_I-C; 1.
DR Gene3D; 3.30.70.2660; -; 1.
DR InterPro; IPR021124; CRISPR-assoc_prot_Cas5.
DR InterPro; IPR013422; CRISPR-assoc_prot_Cas5_N.
DR InterPro; IPR010155; CRISPR-assoc_prot_Cas5d.
DR NCBIfam; TIGR01876; cas_Cas5d; 1.
DR NCBIfam; TIGR02593; CRISPR_cas5; 1.
DR Pfam; PF09704; Cas_Cas5d; 1.
DR PIRSF; PIRSF029950; Cas_CT1134; 1.
PE 3: Inferred from homology;
KW Antiviral defense {ECO:0000256|ARBA:ARBA00023118,
KW ECO:0000256|PIRNR:PIRNR029950};
KW Endonuclease {ECO:0000256|PIRNR:PIRNR029950};
KW Hydrolase {ECO:0000256|PIRNR:PIRNR029950};
KW Nuclease {ECO:0000256|PIRNR:PIRNR029950};
KW Reference proteome {ECO:0000313|Proteomes:UP000051323};
KW RNA-binding {ECO:0000256|PIRNR:PIRNR029950}.
SQ SEQUENCE 225 AA; 24500 MW; 06DD953269BA36F4 CRC64;
MTIGVRLHVW GELACFTRPE MKVERVSYDV MTPSAARGIL EAIHWKPAIR WEVTHIHVLK
PIRFRSIRRN EVSDKASAAN AKKAMNAGTT AGLGIDITAA RQQRAALVLE DVGYVIEARF
HLTDAAGPDD SADKHIAMFT RRAASGQCFH RPCLGTREFA AAFRLLAPGD ALPASTLADP
DRNRDLGYMA FAPGYPGGPP ASFFRAQLTD GVLDLTTLTD KGLMA
//
