ID A0A0Q5UIV6_9SPHN Unreviewed; 719 AA.
AC A0A0Q5UIV6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE SubName: Full=Phytochrome {ECO:0000313|EMBL:KQS48447.1};
GN ORFNames=ASG20_15275 {ECO:0000313|EMBL:KQS48447.1};
OS Sphingomonas sp. Leaf198.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1736299 {ECO:0000313|EMBL:KQS48447.1, ECO:0000313|Proteomes:UP000050871};
RN [1] {ECO:0000313|Proteomes:UP000050871}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf198 {ECO:0000313|Proteomes:UP000050871};
RA Garrido-Oter R.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000050871}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf198 {ECO:0000313|Proteomes:UP000050871};
RA Vorholt J.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: In the N-terminal section; belongs to the phytochrome
CC family. {ECO:0000256|ARBA:ARBA00006402}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQS48447.1}.
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DR EMBL; LMPX01000003; KQS48447.1; -; Genomic_DNA.
DR RefSeq; WP_056054563.1; NZ_LMPX01000003.1.
DR AlphaFoldDB; A0A0Q5UIV6; -.
DR STRING; 1736299.ASG20_15275; -.
DR OrthoDB; 9760752at2; -.
DR Proteomes; UP000050871; Unassembled WGS sequence.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR003594; HATPase_C.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013654; PAS_2.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR InterPro; IPR011495; Sig_transdc_His_kin_sub2_dim/P.
DR PANTHER; PTHR41523:SF7; ETHYLENE RESPONSE SENSOR PROTEIN; 1.
DR PANTHER; PTHR41523; TWO-COMPONENT SYSTEM SENSOR PROTEIN; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF13581; HATPase_c_2; 1.
DR Pfam; PF07568; HisKA_2; 1.
DR Pfam; PF08446; PAS_2; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00022543};
KW Reference proteome {ECO:0000313|Proteomes:UP000050871};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606}.
FT DOMAIN 148..307
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
SQ SEQUENCE 719 AA; 78226 MW; 4AF076483EC85855 CRC64;
MTAQNDVDAT ALDQAQTQDS GLDLTACDRE PIHIPGSIQP HGLLLVADPI SLTIVAGAGD
IEGRLAAEWL GADLAQVLAQ AVPADDVGPG GMVGDPVMGS TERFEVTIHR SGDYLLAELE
PVEAAPMTAT QMLGRLNPMI TMFERATDLS TLCDRAAIAF RQLTGFDRVM IYRFLDDDAG
RVVAEDKSTG LGTFLNHHFP ASDIPKQARA LYVRNRTRTI PTIDYAPAVL RPAGFETLDL
SDVTVRSVSP IHLRYLANME VAASASISIV KDGLLWGLIA CHNATPRGLS PDVRAASATL
ASGLARQIRA KEEAEIYRER LRLRGAEDAV VAKLATEPAP RSIVVTLRDD LRRMLDADGF
AFVQGTIVDT DGVCPAHDEI RDLVAWVCAR SGIEPLATHE LPSLLPRADA YRACASGVLA
MPLIDDGAML FWFRAEQAEE VEWAGNPHKA VSLDPTAVLT PRTSFQSWTQ VVSGRSRRWT
LEEIEAAHRL RRAFHDAHIN QRLRLLNADL QRTLADKDVL IAQKDVLMKE VNHRVQNSLQ
LVAAFLALQA KASDDAKVKE HLAEAQARLS AVALVHRRLY RDDQVESVDL SRYLEELAGD
MKTSLGADWA AQIRLDLAPI LVPTDRAVNI GLVLTELVIN ASKYAYGGQP GPILIALEQH
RNRLRLIVAD DGSGKVGTRE GFGSRMMNAI VAGLSGTIEH DDNMPGLRVI MTAPIVDTV
//
