ID A0A0Q6Z4U2_9BRAD Unreviewed; 189 AA.
AC A0A0Q6Z4U2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=DNA-binding protein {ECO:0000313|EMBL:KQW20955.1};
GN ORFNames=ASC80_12385 {ECO:0000313|EMBL:KQW20955.1};
OS Afipia sp. Root123D2.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC Nitrobacteraceae; Afipia.
OX NCBI_TaxID=1736436 {ECO:0000313|EMBL:KQW20955.1, ECO:0000313|Proteomes:UP000051348};
RN [1] {ECO:0000313|EMBL:KQW20955.1, ECO:0000313|Proteomes:UP000051348}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root123D2 {ECO:0000313|EMBL:KQW20955.1,
RC ECO:0000313|Proteomes:UP000051348};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQW20955.1, ECO:0000313|Proteomes:UP000051348}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root123D2 {ECO:0000313|EMBL:KQW20955.1,
RC ECO:0000313|Proteomes:UP000051348};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQW20955.1}.
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DR EMBL; LMDP01000002; KQW20955.1; -; Genomic_DNA.
DR RefSeq; WP_056297355.1; NZ_LMDP01000002.1.
DR AlphaFoldDB; A0A0Q6Z4U2; -.
DR STRING; 1736436.ASC80_12385; -.
DR OrthoDB; 9782252at2; -.
DR Proteomes; UP000051348; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IEA:UniProt.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0044238; P:primary metabolic process; IEA:InterPro.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 3.30.160.100; Ribosome hibernation promotion factor-like; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR036567; RHF-like.
DR InterPro; IPR003489; RHF/RaiA.
DR Pfam; PF00313; CSD; 1.
DR Pfam; PF02482; Ribosomal_S30AE; 1.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF69754; Ribosome binding protein Y (YfiA homologue); 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:KQW20955.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000051348}.
FT DOMAIN 117..181
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
SQ SEQUENCE 189 AA; 20899 MW; 964C45DE03491C32 CRC64;
MQTPVRTEFQ EMAASPAVEA MIADHVKKLE QLYGRITACR IVVKGPGNRQ KTGGQYDIHI
RLALPDGREV DIGRTPKEDE RHSDLLFAIN DAFKRAGRRL QDKARRMAGM VKSHEGQPVG
TVARLDPAGE FGFLRSSDGD EIYFHRNSVL DGAFSELAVG SRVVFTDELG EKGVQATTVK
LLEKHGLRA
//
