ID A0A0Q8DUH9_9ACTN Unreviewed; 316 AA.
AC A0A0Q8DUH9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Lytic transglycosylase {ECO:0000313|EMBL:KRA31153.1};
GN ORFNames=ASD81_16880 {ECO:0000313|EMBL:KRA31153.1};
OS Nocardioides sp. Root614.
OC Bacteria; Actinomycetota; Actinomycetes; Propionibacteriales;
OC Nocardioidaceae; Nocardioides.
OX NCBI_TaxID=1736571 {ECO:0000313|EMBL:KRA31153.1, ECO:0000313|Proteomes:UP000051699};
RN [1] {ECO:0000313|EMBL:KRA31153.1, ECO:0000313|Proteomes:UP000051699}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root614 {ECO:0000313|EMBL:KRA31153.1,
RC ECO:0000313|Proteomes:UP000051699};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KRA31153.1, ECO:0000313|Proteomes:UP000051699}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root614 {ECO:0000313|EMBL:KRA31153.1,
RC ECO:0000313|Proteomes:UP000051699};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the peptidase C40 family.
CC {ECO:0000256|ARBA:ARBA00007074}.
CC -!- SIMILARITY: Belongs to the transglycosylase Slt family.
CC {ECO:0000256|ARBA:ARBA00007734}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRA31153.1}.
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DR EMBL; LMGV01000007; KRA31153.1; -; Genomic_DNA.
DR RefSeq; WP_056713083.1; NZ_LMGV01000007.1.
DR AlphaFoldDB; A0A0Q8DUH9; -.
DR OrthoDB; 9815778at2; -.
DR Proteomes; UP000051699; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:InterPro.
DR GO; GO:0008933; F:lytic transglycosylase activity; IEA:InterPro.
DR GO; GO:0000270; P:peptidoglycan metabolic process; IEA:InterPro.
DR CDD; cd00254; LT-like; 1.
DR Gene3D; 1.10.530.10; -; 1.
DR Gene3D; 3.90.1720.10; endopeptidase domain like (from Nostoc punctiforme); 1.
DR InterPro; IPR023346; Lysozyme-like_dom_sf.
DR InterPro; IPR000064; NLP_P60_dom.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR InterPro; IPR000189; Transglyc_AS.
DR InterPro; IPR008258; Transglycosylase_SLT_dom_1.
DR PANTHER; PTHR37423:SF2; SOLUBLE LYTIC MUREIN TRANSGLYCOSYLASE; 1.
DR PANTHER; PTHR37423; SOLUBLE LYTIC MUREIN TRANSGLYCOSYLASE-RELATED; 1.
DR Pfam; PF00877; NLPC_P60; 1.
DR Pfam; PF01464; SLT; 1.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF53955; Lysozyme-like; 1.
DR PROSITE; PS51935; NLPC_P60; 1.
DR PROSITE; PS00922; TRANSGLYCOSYLASE; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000051699}.
FT DOMAIN 51..179
FT /note="NlpC/P60"
FT /evidence="ECO:0000259|PROSITE:PS51935"
SQ SEQUENCE 316 AA; 32564 MW; 1646DEA581D6D5B5 CRC64;
MSIDNVTARI GQIQAQLAQF ATTRPASTGF ANALTTETVA ASAASPSGAG DVSGADVVAE
AKKYVGLPYV WGGTNPEKGM DCSGLVQVVY RNLGYDLPRV SNQQAQAGRP VASMAEAQPG
DLIAWDNSSR NNGVDHIAIY IGDGKMIEAP RTGLDIRVVD VPSTPDVIRR ILPDGASAAA
TPTSGAAARV SDATPYAGLI NAAAARTGVP GELLAAVAKQ ESGFNPKAVS PAGAQGLMQL
MPGTARGLGV ENPFDPAQAI DGAARLLRSL IDRFGQTDLA LAAYNAGPGA VARYDGIPPY
RETQNYVRNV MAMVND
//
