ID A0A0Q8XJW4_9SPHN Unreviewed; 434 AA.
AC A0A0Q8XJW4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KRC82267.1};
GN ORFNames=ASE13_08160 {ECO:0000313|EMBL:KRC82267.1};
OS Sphingomonas sp. Root241.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=1736501 {ECO:0000313|EMBL:KRC82267.1, ECO:0000313|Proteomes:UP000051629};
RN [1] {ECO:0000313|EMBL:KRC82267.1, ECO:0000313|Proteomes:UP000051629}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root241 {ECO:0000313|EMBL:KRC82267.1,
RC ECO:0000313|Proteomes:UP000051629};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KRC82267.1, ECO:0000313|Proteomes:UP000051629}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Root241 {ECO:0000313|EMBL:KRC82267.1,
RC ECO:0000313|Proteomes:UP000051629};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRC82267.1}.
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DR EMBL; LMIV01000001; KRC82267.1; -; Genomic_DNA.
DR RefSeq; WP_056613367.1; NZ_LMIV01000001.1.
DR AlphaFoldDB; A0A0Q8XJW4; -.
DR STRING; 1736501.ASE13_08160; -.
DR OrthoDB; 9780299at2; -.
DR Proteomes; UP000051629; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR046531; DUF6596.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR47756:SF1; BLL0085 PROTEIN; 1.
DR PANTHER; PTHR47756; BLL6612 PROTEIN-RELATED; 1.
DR Pfam; PF20239; DUF6596; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF08281; Sigma70_r4_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 20..79
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 121..167
FT /note="RNA polymerase sigma factor 70 region 4 type 2"
FT /evidence="ECO:0000259|Pfam:PF08281"
FT DOMAIN 186..286
FT /note="DUF6596"
FT /evidence="ECO:0000259|Pfam:PF20239"
SQ SEQUENCE 434 AA; 46686 MW; B44E8FEFE281C34B CRC64;
MAGGETQQAI EAVFRIERAR LIAGLARTVR DMDRAEELAQ DALVIALSEW PRSGVPANPG
AWLMTAAKRR AIDAIRRDKM RERKHEEIAQ ELDGETDDAD LIAAMDDDLG DELLGLIFTA
CHPVISADAR AALTLRVIGG LTTDEIARAF LSSEVTIAQR IVRAKKTIGK AGLSFEVPRG
AERATRLSSV LEVVYLIFNE GYAATAGEDL VRPSLCLEAQ RLGRILAALM PEDPEVSGLL
ALMEIQASRL SARTGPDGAL LTLTEQNRAR WDQLLIRRGL DALARAEALG GADGPYALQA
ALAACHARAR TAVDTDWPHI AALYDRLRVV MPSPVVDLNR AVAHSMAFGP EAGLRLVDEI
ADAAALRNYA PLPAARGDFL FRAGRLAEAR SEFEAAASLT RNAREAAFLL ARANACGHPM
LPTSGISKLS GIRI
//
