ID A0A0Q9KQQ1_9BACL Unreviewed; 765 AA.
AC A0A0Q9KQQ1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=HTH araC/xylS-type domain-containing protein {ECO:0000259|PROSITE:PS01124};
GN ORFNames=ASG81_17315 {ECO:0000313|EMBL:KRE40291.1};
OS Paenibacillus sp. Soil522.
OC Bacteria; Bacillota; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.
OX NCBI_TaxID=1736388 {ECO:0000313|EMBL:KRE40291.1, ECO:0000313|Proteomes:UP000051180};
RN [1] {ECO:0000313|Proteomes:UP000051180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Soil522 {ECO:0000313|Proteomes:UP000051180};
RA Garrido-Oter R., Bai Y.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KRE40291.1, ECO:0000313|Proteomes:UP000051180}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Soil522 {ECO:0000313|EMBL:KRE40291.1,
RC ECO:0000313|Proteomes:UP000051180};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRE40291.1}.
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DR EMBL; LMRV01000053; KRE40291.1; -; Genomic_DNA.
DR RefSeq; WP_056636721.1; NZ_LMRV01000053.1.
DR AlphaFoldDB; A0A0Q9KQQ1; -.
DR STRING; 1736388.ASG81_17315; -.
DR OrthoDB; 368621at2; -.
DR Proteomes; UP000051180; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR041522; CdaR_GGDEF.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR43280; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43280:SF2; BIFUNCTIONAL TRANSCRIPTIONAL ACTIVATOR_DNA REPAIR ENZYME ADAA; 1.
DR Pfam; PF17853; GGDEF_2; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 12..32
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 300..319
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 663..762
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 765 AA; 87856 MW; B550B81574008C62 CRC64;
MYRSRFTNIF RSFLISYIVI LIISNVAGYI SYRAAIDVAE SSSIDTSLMV LKQSKDILER
RMDEVEAFTT QIAMNQDLMH LLSESVNEEN YPVYDLRKIW QDVYAYGLTN DFLQYFYIYL
RNYNAVISPK SVYLRSEHFY ELYRYNDLSF EEWKETILEK GHQHWIMPLH TYSDNGNETM
RISYVQSIPL DSINHPMGAI VIPIDQKRIG SLLDSIPNQY GGWAYISDSQ GNTLAIVGTD
ESQVKGLQLV SGTSGDVSKR YIDDTLIISI RSESNDWIYT AGIPKQEIMK KANVIKKNTW
IITSATLLLG LFISLLMAYR NSAPIHKLIG IFMEQVGQDS AKKINGYHFL HGNISSLISN
NKKLETELNR QTPLLRDAFL KRLVKGEFES LNEIRAMASQ TGIELHGEFG YVGLIQVNGY
RGMDSKDVLN ELYAARLIAK QKMQEITGKL NLTDMDSDKI VVILMSNEEP DVVMKREIEA
MITSLRTALE SEYRILLTVS MGAVFHGHPD ISRSYYEAKR AMEHAAFIKV SGVLWHHSMP
KETATFYYPI DLELRLLNAL KAGEQSEVKR IVSLIFEQNF VDRDLSPEMA EQLVGQMKGT
IIKLLDQKGL MESNVMENMR VQTVRIQSTD GLDKVRHDLE NVMEAFCRMI VNNRNKREHE
TVRTLISRLE ELYGDPDMSV YKFAETVGRP ERYISQLFKE QTGQTLSEYL EQMRINKATE
LLVRTGMTID EIARQTGYNS SHSFRRAFKR VSGASPSMYR NTTEK
//
