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Database: UniProt
Entry: A0A0Q9YQE4_9COXI
LinkDB: A0A0Q9YQE4_9COXI
Original site: A0A0Q9YQE4_9COXI 
ID   A0A0Q9YQE4_9COXI        Unreviewed;       295 AA.
AC   A0A0Q9YQE4;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   SubName: Full=HTH-type transcriptional regulator DmlR {ECO:0000313|EMBL:KRG18625.1};
GN   Name=dmlR_1 {ECO:0000313|EMBL:KRG18625.1};
GN   ORFNames=CC99x_01512 {ECO:0000313|EMBL:KRG18625.1};
OS   Candidatus Berkiella cookevillensis.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Legionellales; Coxiellaceae;
OC   Candidatus Berkiella.
OX   NCBI_TaxID=437022 {ECO:0000313|EMBL:KRG18625.1, ECO:0000313|Proteomes:UP000051494};
RN   [1] {ECO:0000313|EMBL:KRG18625.1, ECO:0000313|Proteomes:UP000051494}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CC99 {ECO:0000313|EMBL:KRG18625.1,
RC   ECO:0000313|Proteomes:UP000051494};
RA   Mehari Y.T., Arivett B.A., Farone A.L., Gunderson J.H., Farone M.B.;
RT   "Draft Genome Sequences of Two Novel Amoeba-resistant Intranuclear
RT   Bacteria, Candidatus Berkiella cookevillensis and Candidatus Berkiella
RT   aquae.";
RL   Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRG18625.1}.
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DR   EMBL; LKHV01000006; KRG18625.1; -; Genomic_DNA.
DR   RefSeq; WP_057624603.1; NZ_LKHV02000001.1.
DR   AlphaFoldDB; A0A0Q9YQE4; -.
DR   STRING; 437022.CC99x_01512; -.
DR   PATRIC; fig|1590042.3.peg.1536; -.
DR   OrthoDB; 9786526at2; -.
DR   Proteomes; UP000051494; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08422; PBP2_CrgA_like; 1.
DR   Gene3D; 3.40.190.290; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   PANTHER; PTHR30537; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR   PANTHER; PTHR30537:SF30; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000051494}.
FT   DOMAIN          3..60
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   295 AA;  33018 MW;  E948664B0DC2ABEE CRC64;
     MIDELRALAI FAKTVEAGSF RNGAKELKLS PSVVSHHISQ LEERLGVTLL YRSTRSLSLT
     QEGEQLFFSV QKMVQAAENG LNIITQKSSE PSGKLIITVP AVLTRSSLIK DLALFAKTFP
     KITLSISFTD LQQDLIREGI DLAIRIGDLK NDTLKAKKLF EMKRTLIVAP SYMQSRKHPR
     KPQDLINWDW IGLKTRPDQR TLVNKTGKQF QINFKPRMIV DNLDAICQFA TAGLGLATPP
     SFLVEEDIRQ GLLIEPLPAW SIQSLGVYAV CPPNAAKESL TFRLINFLET RKSSL
//
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