ID A0A0Q9ZB57_9FLAO Unreviewed; 595 AA.
AC A0A0Q9ZB57;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111};
GN ORFNames=APR42_13440 {ECO:0000313|EMBL:KRG30261.1};
OS Salegentibacter mishustinae.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Salegentibacter.
OX NCBI_TaxID=270918 {ECO:0000313|EMBL:KRG30261.1, ECO:0000313|Proteomes:UP000051643};
RN [1] {ECO:0000313|EMBL:KRG30261.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KCTC 12263 {ECO:0000313|EMBL:KRG30261.1};
RA Lin W., Zheng Q.;
RT "Draft genome sequence of Salegentibacter mishustinae KCTC 12263.";
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Binds mRNA; thus facilitating recognition of the initiation
CC point. It is needed to translate mRNA with a short Shine-Dalgarno (SD)
CC purine-rich sequence. {ECO:0000256|PIRNR:PIRNR002111}.
CC -!- SIMILARITY: Belongs to the bacterial ribosomal protein bS1 family.
CC {ECO:0000256|ARBA:ARBA00006767, ECO:0000256|PIRNR:PIRNR002111}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRG30261.1}.
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DR EMBL; LKTP01000002; KRG30261.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0Q9ZB57; -.
DR STRING; 270918.APR42_13440; -.
DR Proteomes; UP000051643; Unassembled WGS sequence.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0005840; C:ribosome; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
DR GO; GO:0006412; P:translation; IEA:InterPro.
DR CDD; cd05687; S1_RPS1_repeat_ec1_hs1; 1.
DR CDD; cd04465; S1_RPS1_repeat_ec2_hs2; 1.
DR CDD; cd05688; S1_RPS1_repeat_ec3; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 6.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR000110; Ribosomal_bS1.
DR InterPro; IPR035104; Ribosomal_protein_S1-like.
DR InterPro; IPR003029; S1_domain.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF13; 30S RIBOSOMAL PROTEIN S1; 1.
DR Pfam; PF00575; S1; 6.
DR PIRSF; PIRSF002111; RpsA; 2.
DR PRINTS; PR00681; RIBOSOMALS1.
DR SMART; SM00316; S1; 6.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 6.
DR PROSITE; PS50126; S1; 6.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000051643};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Ribonucleoprotein {ECO:0000256|PIRNR:PIRNR002111};
KW Ribosomal protein {ECO:0000256|PIRNR:PIRNR002111,
KW ECO:0000313|EMBL:KRG30261.1}; RNA-binding {ECO:0000256|PIRNR:PIRNR002111}.
FT DOMAIN 57..120
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 138..204
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 225..293
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 310..380
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 397..467
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
FT DOMAIN 484..549
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 595 AA; 66869 MW; DDC833136EC53917 CRC64;
MATSSQPAPS EQQENPEKFL EEFNWHNYEE GIDPIDDEKL EEFEKLVAEN FVDTLNDEVV
TGKVINITDR DAIIDINAKS EGVISLNEFR YNPDLKVGDD VEVLIDVRED STGQLILSHR
KARVIQAWDR VNKAHDESLI VNGFVKCRTK GGMIVDVFGI EAFLPGSQID VKPIRDYDAY
VGKTMEFKVV KINHEFKNVV VSHKALIEAD IEEQKKEIIG QLEKGQVLEG TVKNITSYGV
FVDLGGVDGL VHITDLSWSR INHPNEIVEL DQKLNVVILD FDEAKTRIQL GLKQLSKHPW
EALDENLKVG DKVKGKVVVI ADYGAFIEVA DGVEGLIHVS EMSWSTHLRS AQDFVNVGDE
VEAQILTLDR EDRKMSLGIK QLTPDPWTDI TTKYPVGSKH KGIVRNFTNF GVFVELEEGI
DGLIYISDLS WTKKIKHPSE FTNVGDELEV VVLELDVDGR KLSLGHKQVE DNPWDKYETE
FAVGTKHTAE IAEIVDKGAT IDFNEDITAF VPTRHLEKED GNKLTKGESA EFQIIEFNKE
FKRVVASHMA IHKEEEQQIV KQAAKKAAAS QSKDKTTIGD VNADLQALKD KMEGK
//
