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Database: UniProt
Entry: A0A0R0DFF0_9GAMM
LinkDB: A0A0R0DFF0_9GAMM
Original site: A0A0R0DFF0_9GAMM 
ID   A0A0R0DFF0_9GAMM        Unreviewed;       192 AA.
AC   A0A0R0DFF0;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   27-MAR-2024, entry version 39.
DE   SubName: Full=RNA polymerase sigma24 factor {ECO:0000313|EMBL:KRG80341.1};
GN   ORFNames=ABB34_14615 {ECO:0000313|EMBL:KRG80341.1};
OS   Stenotrophomonas daejeonensis.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Stenotrophomonas.
OX   NCBI_TaxID=659018 {ECO:0000313|EMBL:KRG80341.1, ECO:0000313|Proteomes:UP000050940};
RN   [1] {ECO:0000313|EMBL:KRG80341.1, ECO:0000313|Proteomes:UP000050940}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JCM 16244 {ECO:0000313|EMBL:KRG80341.1,
RC   ECO:0000313|Proteomes:UP000050940};
RA   Patil P.P., Midha S., Patil P.B.;
RT   "Genome sequencing and analysis of members of genus Stenotrophomonas.";
RL   Submitted (MAY-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the sigma-70 factor family. ECF subfamily.
CC       {ECO:0000256|ARBA:ARBA00010641}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRG80341.1}.
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DR   EMBL; LDJP01000114; KRG80341.1; -; Genomic_DNA.
DR   RefSeq; WP_057642107.1; NZ_LDJP01000114.1.
DR   AlphaFoldDB; A0A0R0DFF0; -.
DR   STRING; 659018.ABB34_14615; -.
DR   PATRIC; fig|659018.3.peg.351; -.
DR   OrthoDB; 9780326at2; -.
DR   Proteomes; UP000050940; Unassembled WGS sequence.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   CDD; cd06171; Sigma70_r4; 1.
DR   Gene3D; 1.10.1740.10; -; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR039425; RNA_pol_sigma-70-like.
DR   InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR   InterPro; IPR007627; RNA_pol_sigma70_r2.
DR   InterPro; IPR013249; RNA_pol_sigma70_r4_t2.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   NCBIfam; TIGR02937; sigma70-ECF; 1.
DR   PANTHER; PTHR43133:SF46; ECF RNA POLYMERASE SIGMA FACTOR SIGG; 1.
DR   PANTHER; PTHR43133; RNA POLYMERASE ECF-TYPE SIGMA FACTO; 1.
DR   Pfam; PF04542; Sigma70_r2; 1.
DR   Pfam; PF08281; Sigma70_r4_2; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR   SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE   3: Inferred from homology;
KW   Reference proteome {ECO:0000313|Proteomes:UP000050940};
KW   Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription {ECO:0000256|ARBA:ARBA00023082};
KW   Transcription regulation {ECO:0000256|ARBA:ARBA00023082}.
FT   DOMAIN          36..102
FT                   /note="RNA polymerase sigma-70 region 2"
FT                   /evidence="ECO:0000259|Pfam:PF04542"
FT   DOMAIN          133..181
FT                   /note="RNA polymerase sigma factor 70 region 4 type 2"
FT                   /evidence="ECO:0000259|Pfam:PF08281"
SQ   SEQUENCE   192 AA;  21029 MW;  64D56566270462BB CRC64;
     MLAATVTANA SHPQVADDAT LARAAAAGDG HAYECIYRRH APRLYALLWR LCGGSAARAE
     DALQETFIQA WRRLPQFRFE SALGTWLHRL AVNTALMELR ASAAFEALDI GEDGMEVLVG
     LPASMRCNAT GLDLERALET LPPRARAVLV LHDIEGWKHQ EIAEELRMAV GSSKAQLHRA
     RGLLRARLGE TP
//
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