ID A0A0R0E2U1_SOYBN Unreviewed; 1043 AA.
AC A0A0R0E2U1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 44.
DE RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
GN Name=106794133 {ECO:0000313|EnsemblPlants:KRG88492};
GN ORFNames=GLYMA_U035700 {ECO:0000313|EMBL:KRG88492.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EnsemblPlants:KRG88492};
RN [1] {ECO:0000313|EMBL:KRG88492.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG88492.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG88492}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG88492};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG88492.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG88492.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; KZ847319; KRG88492.1; -; Genomic_DNA.
DR RefSeq; XP_014628764.1; XM_014773278.1.
DR AlphaFoldDB; A0A0R0E2U1; -.
DR SMR; A0A0R0E2U1; -.
DR PaxDb; 3847-GLYMA16G34030-1; -.
DR EnsemblPlants; KRG88492; KRG88492; GLYMA_U035700.
DR Gramene; KRG88492; KRG88492; GLYMA_U035700.
DR InParanoid; A0A0R0E2U1; -.
DR OrthoDB; 905172at2759; -.
DR Proteomes; UP000008827; Unassembled WGS sequence.
DR ExpressionAtlas; A0A0R0E2U1; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11017:SF431; NB-ARC DOMAIN PROTEIN; 1.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Plant defense {ECO:0000256|ARBA:ARBA00022821};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1019..1037
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..126
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 1043 AA; 119176 MW; 4404092F3BE49D7B CRC64;
RAHRAPALSK AIQESRIAIT VLSQNYASSS FCLDELVTIL HCKSEGLLVI PVFYKVDPSD
VRHQKGSYGE AMAKHQKRFK AKKEKLQKWR MALKQVADLS GYHFEDGDAY EYKFIGSIVE
EVSRKISRAS LHVADYPVGL ESQVTEVMKL LDVGSDDLVH IIGIHGMGGL GKTTLALEVY
NLIALHFDES CFLQNVREES NKHGLKHLQS ILLSKLLGEK DITLTSWQEG ASTIQHRLQR
KKVLLILDDV NKREQLKAIV GRPDWFGPGS RVIITTRDKH LLKCHEVERT YEVKVLNHNA
ALQLLTWNAF KREKIDPSYE DVLNRVVTYA SGLPLALEII GSNMFGKSVA GWESAVEHYK
RIPNDEILEI LKVSFDALGE EQKNVFLDIA FCLKGCKLTE VEHMLCSLYD NCMKHHIDVL
VDKSLIKVKH GIVEMHDLIQ VVGREIERQR SPEEPGKRKR LWLPKDIIHV LKDNTGTSKI
EIICLDFSIS YKEETVEFNE NAFMKMENLK ILIIRNGKFS KGPNYFPEGL RVLEWHRYPS
NFLPSNFDPI NLVICKLPDS SIKSFEFHGS SKKLGHLTVL KFDRCKFLTQ IPDVSDLPNL
RELSFEDCES LVAVDDSIGF LKKLKKLSAY GCRKLTSFPP LNLTSLETLQ LSSCSSLEYF
PEILGEMENI RELRLTGLYI KELPFSFQNL TGLRLLALSG CGIVQLPCSL AMMPELSSFY
TDYCNRWQWI ELEEGEEKLG SIISSKAQLF CATNCNLCDD FFLAGFKRFA HVGYLNLSGN
NFTILPEFFK ELQFLRTLDV SDCEHLQEIR GLPPILEYFD ARNCVSFTSS STSMLLNQEL
HEAGGTQFVF PGTRIPEWFD QQSSGPSSSF WFRNKFPAKL VFLLIAPVSG ASYPFLEPKL
FINGKVLPFK NEVIDMLKLD HTYIFDLQEL PFKNDNLFEE VAWEKEWNHV EVRYQSVLEY
ENEKRKGVLD LESSLIKATG IHIFKEGVSD IRFDDPYLSS SASESPSFLQ TIALGTRKFS
IAFFLFFSCF LFYYFGFSCQ KFT
//
