ID A0A0R0EIY4_SOYBN Unreviewed; 971 AA.
AC A0A0R0EIY4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 08-NOV-2023, entry version 32.
DE RecName: Full=CCHC-type domain-containing protein {ECO:0000259|PROSITE:PS50158};
GN ORFNames=GLYMA_20G060800 {ECO:0000313|EMBL:KRG90003.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRG90003.1};
RN [1] {ECO:0000313|EMBL:KRG90003.1, ECO:0000313|EnsemblPlants:KRG90003}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRG90003};
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90003.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRG90003}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRG90003};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRG90003.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRG90003.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000853; KRG90003.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0EIY4; -.
DR SMR; A0A0R0EIY4; -.
DR PaxDb; 3847-GLYMA20G06970-1; -.
DR EnsemblPlants; KRG90003; KRG90003; GLYMA_20G060800.
DR Gramene; KRG90003; KRG90003; GLYMA_20G060800.
DR InParanoid; A0A0R0EIY4; -.
DR OMA; NTKVECM; -.
DR Proteomes; UP000008827; Chromosome 20.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR Gene3D; 4.10.60.10; Zinc finger, CCHC-type; 1.
DR InterPro; IPR028919; Viral_movement.
DR InterPro; IPR001878; Znf_CCHC.
DR InterPro; IPR036875; Znf_CCHC_sf.
DR PANTHER; PTHR46249:SF29; CCHC-TYPE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR46249; CCHC-TYPE DOMAIN-CONTAINING PROTEIN-RELATED; 1.
DR Pfam; PF01107; MP; 1.
DR Pfam; PF00098; zf-CCHC; 1.
DR SMART; SM00343; ZnF_C2HC; 1.
DR SUPFAM; SSF57756; Retrovirus zinc finger-like domains; 1.
DR PROSITE; PS50158; ZF_CCHC; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00047};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00047}.
FT DOMAIN 860..874
FT /note="CCHC-type"
FT /evidence="ECO:0000259|PROSITE:PS50158"
FT REGION 296..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 809..851
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 296..324
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 813..827
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 971 AA; 111676 MW; 711A4DD24B94871D CRC64;
MDDWNIPEIS QDQLYVPKTI KDKHNFDYII KTVENNIPLG QDIGEEFHLL SKNSIYEHSQ
KYKYLHIGCV QVAIKPLIDM GIDAIVLMCL RDIRHNKFED SLIGTVKTSL GQGPVYFNCY
PNKTVSLMDI NILDSLFLNI HFHGLDMKEG SIPAALIYRI QYKVMNTCAS RVLLQPQKGE
TTLFITDMTK ANVSLKRIIK WDEVTLPEKW VMEKATPSDP QPAPIIEDIK QDNSGKVEIT
FNRRNSFSSR IEASRSEYES ARRSFSVRTR SIPVGLTRSE LHNQFPTVNL QGLDATSSIP
RTTYNQDQED DQKSIQSPTY SSMEPYDQDI IGDPSTNVIT YWQVRDGEII QSELPPTTKY
QLPNIKDSNN KPVMATPFKT KDINEEVTSE DIKSLMEQAN YTNKYLQILG ETIKTKVVPK
QKSVEEASPS IPIEKPLFKP FKVCEKAKRK IRELRKTKSL VEGVGDNHSD NHSELLNKIG
SLLKVIPETP QTSENTSKMV TRSTSKLINV INEDSDQNSD NTTEIESVSE KNINPINSKH
WKTPSKLYYQ RPTAPDLLLE ERGENNFKSF SANNIYEWNI DAQTEYNIMN TLQYMTMVAM
AYQTSHECSE ETIIDILVAG FSGQLKGWWD NYLTNEEKSK IYSAVKTDLN GKVITNDDDK
EIPDTVNTLI FTIAQHFIGD PSLWKDRSAE LLSNLKCRTL ADFRWYRDTF LTRVYTREDS
QQPFWKEKFL AGLPRSLGDK VRDKIRSQSA NGDIPYENLS YGQLISYVQN VALKICQDDK
IQRQLAKEKA QTNRDLGSFC EQFGLPAYPK QKKKQTSRKE IQDHKPANKR RFSKRRYSQK
PSTSKEIENP KQKIKSKITC YNCGKQGHIS KYCRLKKKLR NLNLEPTIEE QINNLLIETS
EEETETKTSS SVLSYENLNL IQQDDQLSST DDDDMQINTL TREQDLLFEA INSIPDPQEK
KVFLEKNSRR P
//
