ID A0A0R0FTF9_SOYBN Unreviewed; 1098 AA.
AC A0A0R0FTF9;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=TIR domain-containing protein {ECO:0000259|PROSITE:PS50104};
GN Name=100817425 {ECO:0000313|EnsemblPlants:KRH09404};
GN ORFNames=GLYMA_16G213800 {ECO:0000313|EMBL:KRH09404.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH09404.1};
RN [1] {ECO:0000313|EMBL:KRH09404.1, ECO:0000313|EnsemblPlants:KRH09404}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH09404};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH09404.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH09404}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH09404};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH09404.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH09404.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000849; KRH09404.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0FTF9; -.
DR SMR; A0A0R0FTF9; -.
DR PaxDb; 3847-GLYMA16G33921-1; -.
DR EnsemblPlants; KRH09404; KRH09404; GLYMA_16G213800.
DR Gramene; KRH09404; KRH09404; GLYMA_16G213800.
DR InParanoid; A0A0R0FTF9; -.
DR OMA; AMGHIVM; -.
DR Proteomes; UP000008827; Chromosome 16.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0043531; F:ADP binding; IEA:InterPro.
DR GO; GO:0008757; F:S-adenosylmethionine-dependent methyltransferase activity; IEA:UniProt.
DR GO; GO:0006952; P:defense response; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR Gene3D; 1.10.8.430; Helical domain of apoptotic protease-activating factors; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 3.
DR Gene3D; 3.40.50.10140; Toll/interleukin-1 receptor homology (TIR) domain; 1.
DR InterPro; IPR042197; Apaf_helical.
DR InterPro; IPR044974; Disease_R_plants.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR002182; NB-ARC.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR000157; TIR_dom.
DR InterPro; IPR035897; Toll_tir_struct_dom_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR11017; LEUCINE-RICH REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR11017:SF431; NB-ARC DOMAIN PROTEIN; 1.
DR Pfam; PF00560; LRR_1; 1.
DR Pfam; PF00931; NB-ARC; 1.
DR Pfam; PF01582; TIR; 1.
DR PRINTS; PR00364; DISEASERSIST.
DR SMART; SM00255; TIR; 1.
DR SUPFAM; SSF52058; L domain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF52200; Toll/Interleukin receptor TIR domain; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50104; TIR; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Plant defense {ECO:0000256|ARBA:ARBA00022821};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 1074..1092
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 10..177
FT /note="TIR"
FT /evidence="ECO:0000259|PROSITE:PS50104"
SQ SEQUENCE 1098 AA; 125949 MW; 538FD64A8530956E CRC64;
MAATTRSLAS IYDVFLNFRG EDTRYGFTGN LYKALCDKGI HTFFDEDKLH SGDDITPALS
KAIQESRIAI TVLSQNYASS SFCLDELVTI LHCKREGLLV IPVFHNVDPS AVRHLKGSYG
EAMAKHQKRF KAKKEKLQKW RMALHQVADL SGYHFKDGDA YEYKFIGNIV EEVSRKINCA
PLHVADYPVG LGSQVIEVMK LLDVGSDDLV HIIGIHGMGG LGKTTLALAV YNFIALHFDE
SCFLQNVREE SNKHGLKHFQ SILLSKLLGE KDITLTSWQE GASMIQHRLR RKKVLLILDD
VDKREQLEAI VGRSDWFGPG SRVIITTRDK HLLKYHEVER TYEVKVLNHN AALQLLTWNA
FKREKIDPIY DDVLNRVVTY ASGLPLALEV IGSDLFGKTV AEWESAVEHY KRIPSDEILK
ILKVSFDALG EEQKNVFLDI ACCFKGYKWT EVDDILRAFY GNCKKHHIGV LVEKSLIKLN
CYDSGTVEMH DLIQDMGREI ERQRSPEEPW KCKRLWSPKD IFQVLKHNTG TSKIEIICLD
FSISDKEETV EWNENAFMKM ENLKILIIRN GKFSKGPNYF PEGLTVLEWH RYPSNCLPYN
FHPNNLLICK LPDSSITSFE LHGPSKKFWH LTVLNFDQCE FLTQIPDVSD LPNLKELSFD
WCESLIAVDD SIGFLNKLKK LSAYGCRKLR SFPPLNLTSL ETLQLSGCSS LEYFPEILGE
MENIKALDLD GLPIKELPFS FQNLIGLCRL TLNSCGIIQL PCSLAMMPEL SVFRIENCNR
WHWVESEEGE EKVGSMISSK ELWFIAMNCN LCDDFFLTGS KRFTRVEYLD LSGNNFTILP
EFFKELQFLR ALMVSDCEHL QEIRGLPPNL EYFDARNCAS LTSSTKSMLL NQKLHEAGGT
NFMFTGTRIP EWLDQQSSGH SSSFWFRNKF PAKLLCLLIA PVSTGIGVKA KVFINGKILK
RPFYYGSKKI ESMLELDHTY IFDLQPFAFK NNNQFEEVAW EKEWNHVEVR YQIVLTHVKE
KREEGSVIKA TGIYIFKEES SMEQDIRFDD PYLSSSASEN SWLLQTIALG TRKFSIAFFL
FFSCFLFYYF GFSCQKLT
//
