ID A0A0R0G4H1_SOYBN Unreviewed; 1066 AA.
AC A0A0R0G4H1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 26.
DE RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU363044};
DE EC=3.6.4.12 {ECO:0000256|RuleBase:RU363044};
GN ORFNames=GLYMA_15G208500 {ECO:0000313|EMBL:KRH12967.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH12967.1};
RN [1] {ECO:0000313|EMBL:KRH12967.1, ECO:0000313|EnsemblPlants:KRH12967}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH12967};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH12967.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH12967}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH12967};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH12967.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH12967.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- SIMILARITY: Belongs to the helicase family.
CC {ECO:0000256|RuleBase:RU363044}.
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DR EMBL; CM000848; KRH12967.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0G4H1; -.
DR SMR; A0A0R0G4H1; -.
DR STRING; 3847.A0A0R0G4H1; -.
DR PaxDb; 3847-GLYMA15G25585-1; -.
DR EnsemblPlants; KRH12967; KRH12967; GLYMA_15G208500.
DR Gramene; KRH12967; KRH12967; GLYMA_15G208500.
DR InParanoid; A0A0R0G4H1; -.
DR Proteomes; UP000008827; Chromosome 15.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR010285; DNA_helicase_pif1-like.
DR InterPro; IPR025476; Helitron_helicase-like.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR45786; DNA BINDING PROTEIN-LIKE; 1.
DR PANTHER; PTHR45786:SF66; REPLICATION FACTOR-A CARBOXY-TERMINAL DOMAIN PROTEIN; 1.
DR Pfam; PF14214; Helitron_like_N; 1.
DR Pfam; PF05970; PIF1; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU363044};
KW DNA damage {ECO:0000256|RuleBase:RU363044};
KW DNA recombination {ECO:0000256|RuleBase:RU363044};
KW DNA repair {ECO:0000256|RuleBase:RU363044};
KW Helicase {ECO:0000256|RuleBase:RU363044};
KW Hydrolase {ECO:0000256|RuleBase:RU363044};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU363044};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 236..418
FT /note="Helitron helicase-like"
FT /evidence="ECO:0000259|Pfam:PF14214"
SQ SEQUENCE 1066 AA; 122329 MW; EC8DBE1CDD22BC0E CRC64;
MNTREYFDLG DQLIQCRHCN AKMWYHENIS KHSNASSPRF SLCCGDGKIE LSLGPPTIKI
QGQPCHRIGS LLPMPGKEPK FAQLYIYETE NEIFNHNNEI EAHIVSNLQK MLDENNAYAK
SFRMARDRLT DTQVHNVRLK LIVGREKDGC TYNIPSVLEV AALIAGDIDA NSNRDIIVDT
QNGQLQRIHE LHCSYLALQY PLLFPYGEDG YRTDILHRDT LSGKRRKRNR LTMREWFAYR
LQCKPNEDQT MLHSRKLFQQ FVAEGYTMIE SERLSYVRNN QKKLRVDKFC SLQQSSEAGN
TEGLGQGKRI ILPSTFVGSP RYMDQLYFDG IVICSHIGFP NLFTTFTCNP NWPEIHRLLT
PLNLTPIDRP EIISRIFKLK YEQMLSDLTK NHLLGKVIAY MYTVEFQKQG LPHVHLLLFL
HANNKYPSPN DIDNIISAEI PSQKDDPELY KLVQNHMIHG PCEMQLFSMH EGSQCNGDGY
LVYRRRNTGR TITKNGIIIE NRSHINIEWC NQSTSIKYLF KYINKGYDRV TTVMVHDDNE
TVPHVNTPND EIKEYLDCRI FGFPIHGRKP SVERLQFHLP GQHSVLYQDH DDIDDLLSNP
SISKSKFIAR MNTNQAFVEG KNLTYSEFVT KFVKKGYTIG RLQWVSPTTG GLFYLRMMLT
VCRGPISFED IRTVDGVEYS IYREACFAMD FLQDDREFIT AIQEAKDWGS APYLRNLFVL
LLLTSTMNKP EEVWEKTWHW LSDDIVYSHR RSSNTSGLHI GDSNLMNLVL LEVEKLLLAN
QRSFKDYPSM PYPENANLLT HTDNHLILSE LNFNNEELRS EFLNLFSQMT ASLIIWDEGP
MAHKFYFEAL DRSLRDVIKA KSSSDKIFGG KVILFGGDFQ QILPVIPRGS RSDIVNSTIN
SSYLWNHCHV LTLSKNMRLE ANTDATDKEE TAAFAKWILI IGDGTAGQPN DGYGSIEIPK
DLLITEYDDP LYAIVNSTFP NLSHHHTNPE YFQTRAILAS TNETVQEVND YILSLIPDQT
QGLCNGTRLI VTNLAKHVIA ADIISGKNIG QNVYIPRMSM SPSQSP
//
