ID A0A0R0HE85_SOYBN Unreviewed; 322 AA.
AC A0A0R0HE85;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=GLYMA_11G086900 {ECO:0000313|EMBL:KRH28934.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH28934.1};
RN [1] {ECO:0000313|EMBL:KRH28934.1, ECO:0000313|EnsemblPlants:KRH28934}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH28934};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH28934.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH28934}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH28934};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH28934.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH28934.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. P subfamily.
CC {ECO:0000256|ARBA:ARBA00007626}.
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DR EMBL; CM000844; KRH28934.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0HE85; -.
DR SMR; A0A0R0HE85; -.
DR STRING; 3847.A0A0R0HE85; -.
DR PaxDb; 3847-GLYMA11G09204-1; -.
DR EnsemblPlants; KRH28934; KRH28934; GLYMA_11G086900.
DR Gramene; KRH28934; KRH28934; GLYMA_11G086900.
DR InParanoid; A0A0R0HE85; -.
DR OMA; THEQISH; -.
DR Proteomes; UP000008827; Chromosome 11.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR GO; GO:0006397; P:mRNA processing; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 5.
DR PANTHER; PTHR47942:SF63; ATPASE EXPRESSION PROTEIN 3; 1.
DR PANTHER; PTHR47942; TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED; 1.
DR Pfam; PF01535; PPR; 1.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 1.
DR Pfam; PF13812; PPR_3; 1.
DR PROSITE; PS51375; PPR; 3.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 99..133
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 200..234
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 235..269
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRH28934.1"
SQ SEQUENCE 322 AA; 35724 MW; 5FB273B252C3E4FF CRC64;
CTFRRFDTVK QLLDEMPHSL GVPPVDDIFI TIIRGLVLDL AYKFHGSPSL KIVNSILDVL
EKEDIDMARE FHRKSMMASG VEGDDYTFGI LMKGGVAPNT VVYNTLLHAL CRNGKFGRAR
NLMNEMKDPN DVTFNILISG YYKEGNSVQA LVLLEKSFSM GFVPDVVSVT KVLEILSNAG
HATEAAEVLE RVESMGGLLD VVAYNTLIKG FCGAGKVMVG LHFLKQMESK GCLPNVDTYN
VLISGFCESK MLDLVLDLFN DMKTDGIKWN FVTFYTIIIG LCSEGRIEDG FSTLELMEES
KEGSRGHISP YNSIIYGLLK QN
//
