ID A0A0R0HFD0_SOYBN Unreviewed; 707 AA.
AC A0A0R0HFD0;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE RecName: Full=Pre-mRNA-processing protein 40C {ECO:0008006|Google:ProtNLM};
GN Name=100816454 {ECO:0000313|EnsemblPlants:KRH29209};
GN ORFNames=GLYMA_11G103100 {ECO:0000313|EMBL:KRH29210.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH29210.1};
RN [1] {ECO:0000313|EMBL:KRH29210.1, ECO:0000313|EnsemblPlants:KRH29209}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH29209};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH29210.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH29209}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH29209};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH29210.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH29210.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000844; KRH29209.1; -; Genomic_DNA.
DR EMBL; CM000844; KRH29210.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0HFD0; -.
DR EnsemblPlants; KRH29209; KRH29209; GLYMA_11G103100.
DR EnsemblPlants; KRH29210; KRH29210; GLYMA_11G103100.
DR Gramene; KRH29209; KRH29209; GLYMA_11G103100.
DR Gramene; KRH29210; KRH29210; GLYMA_11G103100.
DR Proteomes; UP000008827; Chromosome 11.
DR ExpressionAtlas; A0A0R0HFD0; baseline and differential.
DR GO; GO:0070063; F:RNA polymerase binding; IEA:InterPro.
DR GO; GO:0003712; F:transcription coregulator activity; IEA:InterPro.
DR CDD; cd00201; WW; 2.
DR Gene3D; 2.20.70.10; -; 2.
DR Gene3D; 1.10.10.440; FF domain; 2.
DR InterPro; IPR002713; FF_domain.
DR InterPro; IPR036517; FF_domain_sf.
DR InterPro; IPR045148; TCRG1-like.
DR InterPro; IPR001202; WW_dom.
DR InterPro; IPR036020; WW_dom_sf.
DR PANTHER; PTHR15377; TRANSCRIPTION ELONGATION REGULATOR 1; 1.
DR PANTHER; PTHR15377:SF3; WW DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF01846; FF; 2.
DR Pfam; PF00397; WW; 2.
DR SMART; SM00441; FF; 2.
DR SMART; SM00456; WW; 2.
DR SUPFAM; SSF81698; FF domain; 2.
DR SUPFAM; SSF51045; WW domain; 2.
DR PROSITE; PS51676; FF; 2.
DR PROSITE; PS01159; WW_DOMAIN_1; 2.
DR PROSITE; PS50020; WW_DOMAIN_2; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 352..385
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 410..437
FT /note="WW"
FT /evidence="ECO:0000259|PROSITE:PS50020"
FT DOMAIN 577..631
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT DOMAIN 641..699
FT /note="FF"
FT /evidence="ECO:0000259|PROSITE:PS51676"
FT REGION 1..31
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 138..157
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 187..216
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 510..576
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 138..156
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 188..216
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 510..543
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 707 AA; 75378 MW; C6917E9CA44A6112 CRC64;
MASPAWLPQE SQPPVSGETP LPMASSAHTT PSTAHAKLFN ATAFVAPAPA PPFAYGMLQN
VNASGSSQQS STHPGMKSNS AVNPMVVQPP GVSLHAAPSF SYNIPQSGAI FSSNQQHAQS
STNMPDSVAQ DVGKLSSASS IPHSVPAHTS TSIMPPPSDP NYRPATSWMP TAMSFPVLPV
MPTQGNPGPP GLASSAIISS NPAAPSTGTD SSPAALLRPN MPTSAIASDP TAPQKGLPYP
SVPAMAAPPQ GLWLQPPQMS GVLRPPYLQY PAPFPGPFPF PARGVALPAV PIPDSQPPGV
TPVGAAGGTS TPSSSHQLRG TTALQTEVIS GPADDKKKLN SVDTVNEDAA NNDQLDAWTA
HKTEAGIIYY YNAVTGESTY DKPAGFKGES HQVSAQPIPV SMMDLPGTDW RLVSTSDGKK
YYYNNRTKTS CWQIPNEVAE LKKKQDGDVT KDHLMSVSNT NVLSDRGSGM VTLNAPAINT
GGRDAAALKP SSLQNSPSAL DLIKKKLQDS GTPVASSSIP APSVQTGPES NGSKTVDSTA
KGLQVDNNKD KAKDTNGDAN VSDTSSDSED EDNGPSKEEC IIQFKEMLKE RGVAPFSKWE
KELPKIVFDP RFKAIPSYSA RRSLFEHYVK TRAEEERKEK RAALKAAIEG FKRLLDEASE
DINYNTDYQT FRKKWRNDPR FEALDRKEQE HLLNESLEAE LVCHIKQ
//
