ID A0A0R0HJL5_SOYBN Unreviewed; 1014 AA.
AC A0A0R0HJL5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 27.
DE RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU363044};
DE EC=3.6.4.12 {ECO:0000256|RuleBase:RU363044};
GN ORFNames=GLYMA_11G198400 {ECO:0000313|EMBL:KRH30654.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH30654.1};
RN [1] {ECO:0000313|EMBL:KRH30654.1, ECO:0000313|EnsemblPlants:KRH30654}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH30654};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH30654.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH30654}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH30654};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH30654.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH30654.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- SIMILARITY: Belongs to the helicase family.
CC {ECO:0000256|RuleBase:RU363044}.
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DR EMBL; CM000844; KRH30654.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0HJL5; -.
DR SMR; A0A0R0HJL5; -.
DR STRING; 3847.A0A0R0HJL5; -.
DR EnsemblPlants; KRH30654; KRH30654; GLYMA_11G198400.
DR Gramene; KRH30654; KRH30654; GLYMA_11G198400.
DR InParanoid; A0A0R0HJL5; -.
DR OMA; HEQANDP; -.
DR Proteomes; UP000008827; Chromosome 11.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR010285; DNA_helicase_pif1-like.
DR InterPro; IPR025476; Helitron_helicase-like.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR45786; DNA BINDING PROTEIN-LIKE; 1.
DR PANTHER; PTHR45786:SF84; HELITRON_LIKE_N DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF14214; Helitron_like_N; 1.
DR Pfam; PF05970; PIF1; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU363044};
KW DNA damage {ECO:0000256|RuleBase:RU363044};
KW DNA recombination {ECO:0000256|RuleBase:RU363044};
KW DNA repair {ECO:0000256|RuleBase:RU363044};
KW Helicase {ECO:0000256|RuleBase:RU363044};
KW Hydrolase {ECO:0000256|RuleBase:RU363044};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU363044};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 300..462
FT /note="Helitron helicase-like"
FT /evidence="ECO:0000259|Pfam:PF14214"
SQ SEQUENCE 1014 AA; 117588 MW; B0146C1D8D9D610D CRC64;
MCRLHNNLYN EFEVVSSTST VLLDSEMHDH SFVHEQANDP LQQTYEGFSD DNTENIGDNN
LKYYIKQITP QNDENELSDE RTRKNRNQAI AKYSLCYSIG RIQLLFLKNP PMLLQQPLCD
QESRESRNYQ HNIRAYNMMF AFSSPGDKID KSPITNAWET SNFFLTWQNI LDSLLVTKLK
EMLDEHNVFA KSFRMAKDRY DYFQIENLNL LLITDGKKDG RIYNLPIVLE VAAVIVGDAN
QSINRDIILE RQSGHLQRIN ELHPSYLGLQ YPFFDIKHRD IGDSHQRKRN RLIIREFLCF
KLQSRKDEAQ TLLRSRRLFQ QFIVDGYTMM EAKQLLFIRT HQKQLHCVQH NTLKNAHQPI
ENQNASCGKR IILPSSFVAT LLDFQICFLT FTCNPYWPEI QRSFLGLNLT AQDWLDIVTR
VFKLKLQQLM SDLKGKKLGN VLAYIYTIEF QRRGLPHAHI LLFLDVGSKY PSLADIDRII
SAEIPDSIMK NVLDIFPKKW QPKTVVDQEG YPVYKRHNDG KYIDKNRITL DNRYLVPYNP
NMLLKYKAHL NIECCNQSTF IKYLFKYINK GYDRIIATLV PVQNNDGTTG HTVDEIKHYL
DGRYISPCES CWRIFSFQIH KRSPAIERLY FHLPGENLVI FFQEGKNLTY LQFVSKFTYI
AKYRCWRPRK GGNTIGRFNW VPLSYDQFLR RLFITMLILN SIERPNQVWD ETWECLIDGI
LHQQRRIRNM SGDIVLTVVS SAIASLLLLN GRTAHSKFSI PVPTLDNSTC NIHLGTEQAE
LLKATKLIIW DEAPMTHNGP FSGKVVVFRG GFRKILLVIQ RRSRSNIVHS TINASYMWDY
CTFLKLTTNM CLYSNLTITN AQEIKSFSQW LIDVGDGKLG KAILASTNEV VNQINDYILN
IIPGEEKEYF SYNSIDMRDA AATEGLCNGT RLIVSRMANH VIETQIISGK SIGRQSLQSV
GLYLPKPVFS HAQLYVAFSR VQSKSGLKIV IHDKETKPLN ITTNVVFKEV LQNL
//
