ID A0A0R0JJY5_SOYBN Unreviewed; 270 AA.
AC A0A0R0JJY5;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=PH domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100815080 {ECO:0000313|EnsemblPlants:KRH52725};
GN ORFNames=GLYMA_06G084400 {ECO:0000313|EMBL:KRH52725.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH52725.1};
RN [1] {ECO:0000313|EMBL:KRH52725.1, ECO:0000313|EnsemblPlants:KRH52725}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH52725};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH52725.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH52725}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH52725};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH52725.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH52725.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000839; KRH52725.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0JJY5; -.
DR EnsemblPlants; KRH52725; KRH52725; GLYMA_06G084400.
DR Gramene; KRH52725; KRH52725; GLYMA_06G084400.
DR OMA; EIASSCH; -.
DR Proteomes; UP000008827; Chromosome 6.
DR ExpressionAtlas; A0A0R0JJY5; baseline and differential.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 2.30.29.30; Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB); 1.
DR InterPro; IPR011993; PH-like_dom_sf.
DR InterPro; IPR013666; PH_pln.
DR InterPro; IPR040269; VAB.
DR InterPro; IPR008546; VAN3-bd-like_auxin_canal.
DR PANTHER; PTHR31351; EXPRESSED PROTEIN; 1.
DR PANTHER; PTHR31351:SF2; PHOSPHOINOSITIDE BINDING PROTEIN; 1.
DR Pfam; PF05703; Auxin_canalis; 1.
DR Pfam; PF08458; PH_2; 1.
DR SUPFAM; SSF50729; PH domain-like; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 21..44
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..135
FT /note="VAN3-binding protein-like auxin canalisation"
FT /evidence="ECO:0000259|Pfam:PF05703"
FT DOMAIN 161..264
FT /note="Pleckstrin-like plant"
FT /evidence="ECO:0000259|Pfam:PF08458"
SQ SEQUENCE 270 AA; 29531 MW; 1726EB2D54B74536 CRC64;
MGRWLKDQKE RKKHEIRTHN AHLHAAVSVA GVAAAIASVA ASMASPEMPY ANQKNPPLAS
AAIASAAALV ASHCIEIAED MGAEHDQILT VVNSAINAKT NGDIMTLTAG AATALRGAAT
LKARLQKGPG ATAIPLAEEK CNESKEANIL TALDYVFRGG ELFKRTRKGD LHWKQVSFNI
NSNLQVVIKM KSKHMAGTFT KKKKYIVTGV CNDIPVWPGR EKEDINEKRA YFGIKTKDRT
IEFECVSKGD KQFWLEGIQY MLNCRVKVTI
//
