ID A0A0R0JM14_SOYBN Unreviewed; 739 AA.
AC A0A0R0JM14;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=Clp R domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100793074 {ECO:0000313|EnsemblPlants:KRH54050};
GN ORFNames=GLYMA_06G162200 {ECO:0000313|EMBL:KRH54050.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH54050.1};
RN [1] {ECO:0000313|EMBL:KRH54050.1, ECO:0000313|EnsemblPlants:KRH54050}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH54050};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH54050.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH54050}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH54050};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH54050.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH54050.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the ClpA/ClpB family.
CC {ECO:0000256|RuleBase:RU004432}.
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DR EMBL; CM000839; KRH54050.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0JM14; -.
DR EnsemblPlants; KRH54050; KRH54050; GLYMA_06G162200.
DR Gramene; KRH54050; KRH54050; GLYMA_06G162200.
DR OMA; SCKRVFE; -.
DR Proteomes; UP000008827; Chromosome 6.
DR ExpressionAtlas; A0A0R0JM14; baseline and differential.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd19499; RecA-like_ClpB_Hsp104-like; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 3.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR003959; ATPase_AAA_core.
DR InterPro; IPR019489; Clp_ATPase_C.
DR InterPro; IPR001270; ClpA/B.
DR InterPro; IPR018368; ClpA/B_CS1.
DR InterPro; IPR028299; ClpA/B_CS2.
DR InterPro; IPR041546; ClpA/ClpB_AAA_lid.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR11638; ATP-DEPENDENT CLP PROTEASE; 1.
DR PANTHER; PTHR11638:SF185; ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT; 1.
DR Pfam; PF00004; AAA; 1.
DR Pfam; PF07724; AAA_2; 1.
DR Pfam; PF17871; AAA_lid_9; 1.
DR Pfam; PF10431; ClpB_D2-small; 1.
DR PRINTS; PR00300; CLPPROTEASEA.
DR SMART; SM00382; AAA; 2.
DR SMART; SM01086; ClpB_D2-small; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00870; CLPAB_1; 1.
DR PROSITE; PS00871; CLPAB_2; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840, ECO:0000256|RuleBase:RU004432};
KW Chaperone {ECO:0000256|RuleBase:RU004432};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741,
KW ECO:0000256|RuleBase:RU004432};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 112..261
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 457..599
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
FT DOMAIN 637..727
FT /note="Clp ATPase C-terminal"
FT /evidence="ECO:0000259|SMART:SM01086"
FT REGION 44..69
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..69
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 739 AA; 81417 MW; C69F16D7B0B49D41 CRC64;
MMEVLVGSFT VYKYDFRLGT NGSQLASVAF SRLQKEIAKD GREPNVISKG VPNKSISRKG
SDAGASATTG EESALSQFCV DLTARASEGR IDPVVGREVE VQRIIQILCR KTKSNPILLG
EAGVGKTAIA EGMALRIAKA DVAPFLLTKR VMSLDIALLM AGAKERGELE ERVTKLVKDI
IKSGDVILFI DEVHILVQAG TIGRGNKGSG LDIANLLKPA LGRGQFQCIA STTLDEYRLY
FEKDTALARR FQPVWVDEPS EDDAIKILMG LREKYEAHHK CRYTAEAIKA AVDLSARYIV
DRYLPDKAID LIDEAGSRAC IEAFKKKKEH ETGILSKCPA DYWQEIKDVK SMHEMENKLK
YYGASSIDDT NELILDSYLS STTTDNEPIE VGPEDIAAVA SLWSGIPVQK LTADQRILLL
DLENQLRKRV IGQEEAVAAI SRAVKRSRVG LKDPDRPIAA MLFCGPTGVG KTELAKSLAA
CYFGSEAAMV RLDMSEYMER HTVSKLIGSP PGYVGYGEGG VLTEAIRRKP FTLLLLDEIE
KAHPDIFNIL LQILEDGQLT DSQGRRVSFK NALVVMTSNV GSSAIAKGRH NSIGFLIPDD
KTTSYNGLKS MVIEELRSYF RPELLNRIDE VVVFQPLEKS QLLQILDLLL QDMKKRVLSL
GVHVKVSEAV KNLVCQQGYN PTYGARPLRR AITSLIEDPL SEAFLYGECK QGDTVLIDLD
ANGNPFVTNQ LDQIVNLSD
//
