ID A0A0R0K2B2_SOYBN Unreviewed; 679 AA.
AC A0A0R0K2B2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=RimM N-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100802788 {ECO:0000313|EnsemblPlants:KRH59080};
GN ORFNames=GLYMA_05G164500 {ECO:0000313|EMBL:KRH59080.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH59080.1};
RN [1] {ECO:0000313|EMBL:KRH59080.1, ECO:0000313|EnsemblPlants:KRH59080}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH59080};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH59080.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH59080}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH59080};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH59080.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH59080.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CM000838; KRH59080.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0K2B2; -.
DR SMR; A0A0R0K2B2; -.
DR STRING; 3847.A0A0R0K2B2; -.
DR EnsemblPlants; KRH59080; KRH59080; GLYMA_05G164500.
DR Gramene; KRH59080; KRH59080; GLYMA_05G164500.
DR InParanoid; A0A0R0K2B2; -.
DR OMA; FSCINAC; -.
DR Proteomes; UP000008827; Chromosome 5.
DR ExpressionAtlas; A0A0R0K2B2; baseline and differential.
DR GO; GO:0005840; C:ribosome; IEA:InterPro.
DR GO; GO:0043022; F:ribosome binding; IEA:InterPro.
DR GO; GO:0003977; F:UDP-N-acetylglucosamine diphosphorylase activity; IBA:GO_Central.
DR GO; GO:0006364; P:rRNA processing; IEA:InterPro.
DR GO; GO:0006048; P:UDP-N-acetylglucosamine biosynthetic process; IBA:GO_Central.
DR Gene3D; 2.30.30.240; PRC-barrel domain; 1.
DR Gene3D; 2.40.30.60; RimM; 1.
DR HAMAP; MF_00014; Ribosome_mat_RimM; 1.
DR InterPro; IPR029044; Nucleotide-diphossugar_trans.
DR InterPro; IPR027275; PRC-brl_dom.
DR InterPro; IPR011033; PRC_barrel-like_sf.
DR InterPro; IPR011961; RimM.
DR InterPro; IPR002676; RimM_N.
DR InterPro; IPR036976; RimM_N_sf.
DR InterPro; IPR009000; Transl_B-barrel_sf.
DR InterPro; IPR039741; UDP-sugar_pyrophosphorylase.
DR NCBIfam; TIGR02273; 16S_RimM; 1.
DR PANTHER; PTHR11952:SF10; 16S RRNA PROCESSING PROTEIN RIMM FAMILY; 1.
DR PANTHER; PTHR11952; UDP- GLUCOSE PYROPHOSPHORYLASE; 1.
DR Pfam; PF05239; PRC; 1.
DR Pfam; PF01782; RimM; 1.
DR SUPFAM; SSF53448; Nucleotide-diphospho-sugar transferases; 1.
DR SUPFAM; SSF50346; PRC-barrel domain; 1.
DR SUPFAM; SSF50447; Translation proteins; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 87..174
FT /note="RimM N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01782"
FT DOMAIN 181..274
FT /note="PRC-barrel"
FT /evidence="ECO:0000259|Pfam:PF05239"
SQ SEQUENCE 679 AA; 77395 MW; 3424ED6F5B5B2BE7 CRC64;
MQIQALPPAL QRPFQPPLSL GFPFKPYFLT PTKHAPWHST NNSFVLYSRF LHAVKFRRSF
ATVTATTDEA VIDDSYTTNN ERGFVNIGYI SSVHGIQGEI RVKPATDFPR LRFSTPGRRW
LKSKVLGGES VQEVELEEGR EHPALKSWIL KFRGIDTVEQ AKMLIGATLL VTDEDRPELE
EGEFYTHDLI GMRVFMKENG KLVGTVVNVF NSGANDLLQI VLDSSFDMLD KSGKSRSAED
ASDQLVLVPF VEAIVPDVDM KKREMHITPP KGLLELNLRF DERSKKERRQ LEWKERKKFQ
KHLIAAKKKL IEMEQKHVFH GFQYGEKDQW SLLSDQIVGV NSKLLQEALQ SLERPAKRWK
VAELVSAIEA KLINSIQIPE EYFLNGSENK FFRDMQEKGA ELMSKGKMAI VFLLNEEERQ
GSISDSNMIE NEAIDTSVLR MFQKLQQNNN LFNKYSKRSE KCPVKDRVSV PLILVSSAQK
IHSLRNLFRS NNYFAFDSEK VWFLEEEKLP VVSSLPEGQN KYKILMKSPW EILQSPVGSG
GLISLFSKHS IVDNLIDMGV EYIEFCCPSE RTAGGNSLLF GLINSREAKI GIQISPKITD
LEENFDMIFS MDFVKKLTKQ SNKLQFDAIP KAHSFVEKVD KEWVTVTSST PNSYELSCSI
HDSLNACSLD KVCIVEVTE
//
