ID A0A0R0K3T2_SOYBN Unreviewed; 774 AA.
AC A0A0R0K3T2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=RST domain-containing protein {ECO:0000259|PROSITE:PS51879};
GN Name=100798514 {ECO:0000313|EnsemblPlants:KRH61391};
GN ORFNames=GLYMA_04G044700 {ECO:0000313|EMBL:KRH61392.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH61392.1};
RN [1] {ECO:0000313|EMBL:KRH61392.1, ECO:0000313|EnsemblPlants:KRH61391}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH61391};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH61392.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH61391}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH61391};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH61392.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH61392.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the TAF4 family.
CC {ECO:0000256|ARBA:ARBA00006178}.
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DR EMBL; CM000837; KRH61391.1; -; Genomic_DNA.
DR EMBL; CM000837; KRH61392.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0K3T2; -.
DR EnsemblPlants; KRH61391; KRH61391; GLYMA_04G044700.
DR EnsemblPlants; KRH61392; KRH61392; GLYMA_04G044700.
DR Gramene; KRH61391; KRH61391; GLYMA_04G044700.
DR Gramene; KRH61392; KRH61392; GLYMA_04G044700.
DR OMA; HIMMMNR; -.
DR Proteomes; UP000008827; Chromosome 4.
DR ExpressionAtlas; A0A0R0K3T2; baseline and differential.
DR GO; GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd08045; TAF4; 1.
DR Gene3D; 1.10.20.10; Histone, subunit A; 1.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR022003; RST.
DR InterPro; IPR045144; TAF4.
DR InterPro; IPR007900; TAF4_C.
DR PANTHER; PTHR15138; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR PANTHER; PTHR15138:SF14; TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4; 1.
DR Pfam; PF12174; RST; 1.
DR Pfam; PF05236; TAF4; 1.
DR PROSITE; PS51879; RST; 1.
PE 3: Inferred from homology;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 188..259
FT /note="RST"
FT /evidence="ECO:0000259|PROSITE:PS51879"
FT REGION 1..97
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 114..147
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 296..361
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 378..410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 493..515
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 532..606
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 754..774
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 33..70
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..91
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 296..325
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 335..361
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 501..515
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 532..569
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 592..606
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 774 AA; 85434 MW; 922FCDD3DB7171EC CRC64;
MDPSIVKLLE DDEDESMHSG ADVEAFQAAL NRDIGGDTST SQLSGSDTGS NNSLSQSLPK
WPTSSHDNQS DCHNQEPKVV QHQEQRHSSE MEQKPQQPLV EQLHNVASKD AINLPSSQKQ
SQDESVQGHT VQAPHQNSQT NGIQNSEKDP VFNHEAVNTH NSNHGSQYAK LQQMSNQQAT
VNEQPGSQVN RNKQVPFAML LPMLIPQLPK DRAMQLQTLF NKLKKDEMPK DQFVRLMKGI
VGDQMLRLAL TKVQLQTRSN PGPAGQQHPP VRMPNVNSGA TKFNDPHALA QLHQRSMNAA
ADQSNNTSSA VQVKNEPTYP TMEINAKKSQ KLDVQVESEG VQLNQLPSSS SNAVSQEMER
SSLHLQGLNK EQQQHLHFPS AYGSSGGNYN PFSGSTSSST SSLRPQPLDS HMRQIPHQSI
SPNQLGGTTQ GLIGLTKLDQ QNSFNDPKRM PGGFVSPMVN NTASQLTTNS WQPSANKEQN
SASFSSVPYV KKEPNDLSTE QQHRHNVSNQ GTLKEEFSRG LPASTSMLHT TSSSLLPLNS
SSPSVSQLDP SATLSSQIPS NTSVINARTP LKKPSPGQKK PIEALGSSPP PPSKKQKVSG
ASLEPSIEQL NDVTAVSGVD LREEEEQLFS GPKEDSRASE AFRRVVQEEE ERLILQKAPL
QRKLIEIITE CGLKSMSDDL ERCLSLCVEE RMRGVISNVI RMSKQRVDLE KTRHRTVVTS
DVRQQILTMN RKAREEWEKK QAETEKLRKL NDVDCNAGID GDKEKDEGRT KAMK
//
