ID A0A0R0KG72_SOYBN Unreviewed; 613 AA.
AC A0A0R0KG72;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=NPH3 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=100799524 {ECO:0000313|EnsemblPlants:KRH66064};
GN ORFNames=GLYMA_03G080600 {ECO:0000313|EMBL:KRH66064.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH66064.1};
RN [1] {ECO:0000313|EMBL:KRH66064.1, ECO:0000313|EnsemblPlants:KRH66064}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH66064};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH66064.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH66064}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH66064};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH66064.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH66064.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
CC -!- SIMILARITY: Belongs to the NPH3 family. {ECO:0000256|PROSITE-
CC ProRule:PRU00982}.
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DR EMBL; CM000836; KRH66064.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0KG72; -.
DR SMR; A0A0R0KG72; -.
DR EnsemblPlants; KRH66064; KRH66064; GLYMA_03G080600.
DR Gramene; KRH66064; KRH66064; GLYMA_03G080600.
DR InParanoid; A0A0R0KG72; -.
DR OrthoDB; 2940143at2759; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000008827; Chromosome 3.
DR ExpressionAtlas; A0A0R0KG72; baseline and differential.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR InterPro; IPR000210; BTB/POZ_dom.
DR InterPro; IPR043454; NPH3/RPT2-like.
DR InterPro; IPR027356; NPH3_dom.
DR InterPro; IPR011333; SKP1/BTB/POZ_sf.
DR PANTHER; PTHR32370:SF21; NPH3 DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR32370; OS12G0117600 PROTEIN; 1.
DR Pfam; PF00651; BTB; 1.
DR Pfam; PF03000; NPH3; 1.
DR SUPFAM; SSF54695; POZ domain; 1.
DR PROSITE; PS50097; BTB; 1.
DR PROSITE; PS51649; NPH3; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 32..100
FT /note="BTB"
FT /evidence="ECO:0000259|PROSITE:PS50097"
FT DOMAIN 205..487
FT /note="NPH3"
FT /evidence="ECO:0000259|PROSITE:PS51649"
FT REGION 582..613
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 525..559
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 583..613
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 613 AA; 68768 MW; E5D30B4D22CA3295 CRC64;
MLLFSSYTNC CLKINESSCL LLCAWIFRDV PSDITIEVNG GTFSLHKFPL VSRSGRIRRL
VAEHRDSDIS RVELLNLPGG AECFELAAKF CYGINFEITS TNVAQLCCVS DYLEMTEDFS
KDNLGSRAEE YLDSIVCKNL EMCVEVLQQC ESLLPLADAL KVVSRCIDAI ASKACAEQIA
SSFSRLEYSS SGRLHMSRQA KCDGDWWIED LSVLRIDMYQ RVITAMKCRG VRPESIGASL
VNYAQKELTK KSSLWNPSSQ TNVDSNSTLH EKLVVETIVS LLPVEKLAVP INFLFGLLRS
AMMLDCTIAS RLDMERRIGS QLDVATLDDI LIPSFRHAGD TLFDVDTVHR ILVNFCQQDD
SEEEPEDASV FESDSPISPS QTALVKVSKL MDNYLAEIAP DANLKLSKFM VIAETLPAHA
RTIHDGLYRA IDIYLKAHQG LTDLDKKKLC KLIDFQKLSQ EAGAHAAQNE RLPVQSIVQV
LYFEQLRLRN SLSCSYGEDD PKPIHQSWRI SSGALSAAMS PRDNYASLRR ENRELKLELA
RLRMRLNDLE REHVCMKRDM AKSGSRKFMS SFSKKIGKLS LFGHNSSRGS SSPSRNSQRT
DSKVIERTCA STE
//
