ID A0A0R0KWW8_SOYBN Unreviewed; 941 AA.
AC A0A0R0KWW8;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 38.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN ORFNames=GLYMA_02G144100 {ECO:0000313|EMBL:KRH71367.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH71367.1};
RN [1] {ECO:0000313|EMBL:KRH71367.1, ECO:0000313|EnsemblPlants:KRH71367}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH71367};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH71367.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH71367}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH71367};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH71367.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH71367.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the PPR family. PCMP-H subfamily.
CC {ECO:0000256|ARBA:ARBA00006643}.
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DR EMBL; CM000835; KRH71367.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0KWW8; -.
DR SMR; A0A0R0KWW8; -.
DR STRING; 3847.A0A0R0KWW8; -.
DR EnsemblPlants; KRH71367; KRH71367; GLYMA_02G144100.
DR Gramene; KRH71367; KRH71367; GLYMA_02G144100.
DR InParanoid; A0A0R0KWW8; -.
DR OMA; IQCNALL; -.
DR Proteomes; UP000008827; Chromosome 2.
DR GO; GO:0043231; C:intracellular membrane-bounded organelle; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IBA:GO_Central.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR046849; Eplus_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR045215; PPR_prot_At1g15510.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 6.
DR PANTHER; PTHR24015:SF739; OS03G0644200 PROTEIN; 1.
DR PANTHER; PTHR24015; OS07G0578800 PROTEIN-RELATED; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF20430; Eplus_motif; 1.
DR Pfam; PF01535; PPR; 7.
DR Pfam; PF13041; PPR_2; 3.
DR PROSITE; PS51375; PPR; 7.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000008827};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT REPEAT 127..161
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 230..264
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 300..330
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 331..365
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 432..466
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 532..566
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 633..667
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 849..941
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 941 AA; 104672 MW; 29D98B9EFF030EC8 CRC64;
MRSLFRCGTV HLHACTITMS TSILTPLPLK PISVNTLNKG TLKPAFQSLT LLSTHPLATP
SRLEHAHSLL LDLCVAAKAL PQGQQLHALL LKSHLSAFLA TKLVLMYGKC GSLRDAVKVF
DEMSERTIFS WNALMGAFVS SGKYLEAIEL YKDMRVLGVA IDACTFPSVL KACGALGESR
LGAEIHGVAV KCGYGEFVFV CNALIAMYGK CGDLGGARVL FDGIMMEKED TVSWNSIISA
HVAEGNCLEA LSLFRRMQEV GVASNTYTFV AALQGVEDPS FVKLGMGIHG AVLKSNHFAD
VYVANALIAM YAKCGRMEDA GRVFESMLCR DYVSWNTLLS GLVQNELYSD ALNYFRDMQN
SGQKPDQVSV LNLIAASGRS GNLLKGKEVH AYAIRNGLDS NMQIGNTLVD MYAKCCCVKY
MGHAFECMHE KDLISWTTII AGYAQNEFHL EAINLFRKVQ VKGMDVDPMM IGSVLRACSG
LKSRNFIREI HGYVFKRDLA DIMLQNAIVN VYGEVGHIDY ARRAFESIRS KDIVSWTSMI
TCCVHNGLPV EALELFYSLK QTNIQPDSIA IISALSATAN LSSLKKGKEI HGFLIRKGFF
LEGPIASSLV DMYACCGTVE NSRKMFHSVK QRDLILWTSM INANGMHGCG NKAIALFKKM
TDQNVIPDHI TFLALLYACS HSGLMVEGKR FFEIMKYGYQ LEPWPEHYAC MVDLLSRSNS
LEEAYHFVRN MPIKPSSEIW CALLGACHIH SNKELGELAA KELLQSDTEN SGKYALISNI
FAADGRWNDV EEVRLRMKGN GLKKNPGCSW IEVDNKIHTF MARDKSHPQT DDIYLKLAQF
TKLLEKKGGY IAQTKFVFHN VSEEEKTQML YGHSERLALG YGLLVTPKGT CIRITKNLRI
CDDCHTFFKI ASEVSQRPLV VRDANRFHHF ERGLCSCGDF W
//
