ID A0A0R0L7X2_SOYBN Unreviewed; 1155 AA.
AC A0A0R0L7X2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE RecName: Full=ATP-dependent DNA helicase {ECO:0000256|RuleBase:RU363044};
DE EC=3.6.4.12 {ECO:0000256|RuleBase:RU363044};
GN ORFNames=GLYMA_02G158900 {ECO:0000313|EMBL:KRH71615.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH71615.1};
RN [1] {ECO:0000313|EMBL:KRH71615.1, ECO:0000313|EnsemblPlants:KRH71615}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH71615};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH71615.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH71615}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH71615};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH71615.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH71615.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + H2O = ADP + H(+) + phosphate; Xref=Rhea:RHEA:13065,
CC ChEBI:CHEBI:15377, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:43474, ChEBI:CHEBI:456216; EC=3.6.4.12;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|RuleBase:RU363044};
CC -!- SIMILARITY: Belongs to the helicase family.
CC {ECO:0000256|RuleBase:RU363044}.
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DR EMBL; CM000835; KRH71615.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R0L7X2; -.
DR STRING; 3847.A0A0R0L7X2; -.
DR EnsemblPlants; KRH71615; KRH71615; GLYMA_02G158900.
DR Gramene; KRH71615; KRH71615; GLYMA_02G158900.
DR InParanoid; A0A0R0L7X2; -.
DR Proteomes; UP000008827; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003678; F:DNA helicase activity; IEA:InterPro.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR GO; GO:0000723; P:telomere maintenance; IEA:InterPro.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR010285; DNA_helicase_pif1-like.
DR InterPro; IPR025476; Helitron_helicase-like.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR10492:SF78; ATP-DEPENDENT DNA HELICASE; 1.
DR PANTHER; PTHR10492; UNCHARACTERIZED; 1.
DR Pfam; PF14214; Helitron_like_N; 1.
DR Pfam; PF05970; PIF1; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|RuleBase:RU363044};
KW DNA damage {ECO:0000256|RuleBase:RU363044};
KW DNA recombination {ECO:0000256|RuleBase:RU363044};
KW DNA repair {ECO:0000256|RuleBase:RU363044};
KW Helicase {ECO:0000256|RuleBase:RU363044};
KW Hydrolase {ECO:0000256|RuleBase:RU363044};
KW Nucleotide-binding {ECO:0000256|RuleBase:RU363044};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 268..323
FT /note="Helitron helicase-like"
FT /evidence="ECO:0000259|Pfam:PF14214"
SQ SEQUENCE 1155 AA; 132779 MW; 0F39B7AE947E6AB6 CRC64;
MQCRYCNAQM WYDERISKDK NCQSPRFNLC YGDGKVELPL LQNPPQYLQR LLFDDNTIDS
KNYQHNLRAY NMMFAFTSAG IKLDKTVNNS RRPPTIRIQG QPCHRIGSLL PMPGKNPNLH
SYISLTQKMN QYSRIKSHIV LALTHMLDQH NSYAKSFRMV RDRLADDQAD NIKLQLIAAR
GKDGRVYNMP NIPEIVALIV GDFHPGSKRD IIVETQNGEL QRIHELHPSY LPLQYPLLFP
YGEDGYRADI LHRSTSSSKK RKLLSPLNLK PTNRPDIVSR IFILKYEQML LDLTKGQLLG
KVVAYMHTIE FQKRGLPHVH LLLFLHSDNK YPSSTDIDQI ISAEIPSHED DPKLYRLVQN
HMIHGPCGIL QPNSPCMKEG KCSRFYPKQF QPQTLLDSNG YPVYRRRNNG HSISKNGVII
DNRYIVPYNP KLLKKYLAHI NIEWCNQSTS IKYLFKYINK GYDRVTDVMV SNSNDTTQNV
NIQNDELKEY LDCRIFAFPI HGRKPAVERF YFHLPDQHSV LYEDHDDIDD VLSKPTISDS
KFLAWMNTNK CFAEARNLTY SQFVSKFVYN KRNKSWQPKK KGYTIGRLIW VPPTTGKLFY
LRMMLGSCKG PTSFEDIRTV ANIQYPTYTE ACFAMGFLQD DREYVEAIKE AKEWGTTNYL
RKLFVLILLT GAMTKPEEIN DDTLRNLTLI EIEQILHINQ RSLKDYPTMP YPQDINLISY
LQNNLVLSEL DYNHDVTRSK FEHLFASMTD EQKTIYDRII QAINNNEGGM FFLYGFGGTG
KTFMWRTLAS SLRAENQIVI IVASSGIASL LLPGGRTAHS RFKIPVPIFE DSTCNIHQGT
QLAELLNQTS LIIWDEAPMA HKFCFEALDQ SLKDIITNKS NSNQIFGGKV IVFGGDFRQI
LPIIPRRTRS DIIYAIINSS YLWDSCEILT LTKNMRLHIN LESIDEQETA TFAKWILDIG
DGIIGDENDA YATIQIPAHL LITEYDDPIS AIVKSTFPDL DQHHNNPQFF KSKAILPSTN
ETVEQINHYV LSFIPGNYLI TYLIDISSVK NIITEIAILQ TIGDHMEYLS SDSVDKSETS
EDLHFQSITT EFLNSLNTPM AEHVIAAEII SGKNIGLTVY IPRMSMSPSQ SPWPFKLLRR
KFPIMLSYAM TINKS
//
