ID A0A0R0LBQ6_SOYBN Unreviewed; 1310 AA.
AC A0A0R0LBQ6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=SNF2 domain-containing protein CLASSY 2 {ECO:0008006|Google:ProtNLM};
GN Name=100785036 {ECO:0000313|EnsemblPlants:KRH73246};
GN ORFNames=GLYMA_02G261800 {ECO:0000313|EMBL:KRH73247.1};
OS Glycine max (Soybean) (Glycine hispida).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine;
OC Glycine subgen. Soja.
OX NCBI_TaxID=3847 {ECO:0000313|EMBL:KRH73247.1};
RN [1] {ECO:0000313|EMBL:KRH73247.1, ECO:0000313|EnsemblPlants:KRH73246}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. Williams 82 {ECO:0000313|EnsemblPlants:KRH73246};
RC TISSUE=Callus {ECO:0000313|EMBL:KRH73247.1};
RX PubMed=20075913; DOI=10.1038/nature08670;
RA Schmutz J., Cannon S.B., Schlueter J., Ma J., Mitros T., Nelson W.,
RA Hyten D.L., Song Q., Thelen J.J., Cheng J., Xu D., Hellsten U., May G.D.,
RA Yu Y., Sakurai T., Umezawa T., Bhattacharyya M.K., Sandhu D.,
RA Valliyodan B., Lindquist E., Peto M., Grant D., Shu S., Goodstein D.,
RA Barry K., Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N.,
RA Joshi T., Libault M., Sethuraman A., Zhang X.-C., Shinozaki K.,
RA Nguyen H.T., Wing R.A., Cregan P., Specht J., Grimwood J., Rokhsar D.,
RA Stacey G., Shoemaker R.C., Jackson S.A.;
RT "Genome sequence of the palaeopolyploid soybean.";
RL Nature 463:178-183(2010).
RN [2] {ECO:0000313|EnsemblPlants:KRH73246}
RP IDENTIFICATION.
RC STRAIN=Williams 82 {ECO:0000313|EnsemblPlants:KRH73246};
RG EnsemblPlants;
RL Submitted (FEB-2018) to UniProtKB.
RN [3] {ECO:0000313|EMBL:KRH73247.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Callus {ECO:0000313|EMBL:KRH73247.1};
RA Schmutz J., Cannon S., Schlueter J., Ma J., Mitros T., Nelson W., Hyten D.,
RA Song Q., Thelen J., Cheng J., Xu D., Hellsten U., May G., Yu Y.,
RA Sakurai T., Umezawa T., Bhattacharyya M., Sandhu D., Valliyodan B.,
RA Lindquist E., Peto M., Grant D., Shu S., Goodstein D., Barry K.,
RA Futrell-Griggs M., Abernathy B., Du J., Tian Z., Zhu L., Gill N., Joshi T.,
RA Libault M., Sethuraman A., Zhang X., Shinozaki K., Nguyen H., Wing R.,
RA Cregan P., Specht J., Grimwood J., Rokhsar D., Stacey G., Shoemaker R.,
RA Jackson S.;
RT "WGS assembly of Glycine max.";
RL Submitted (JUL-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CM000835; KRH73246.1; -; Genomic_DNA.
DR EMBL; CM000835; KRH73247.1; -; Genomic_DNA.
DR EMBL; CM000835; KRH73248.1; -; Genomic_DNA.
DR RefSeq; XP_014625466.1; XM_014769980.1.
DR AlphaFoldDB; A0A0R0LBQ6; -.
DR STRING; 3847.A0A0R0LBQ6; -.
DR PaxDb; 3847-GLYMA02G42980-2; -.
DR EnsemblPlants; KRH73246; KRH73246; GLYMA_02G261800.
DR EnsemblPlants; KRH73247; KRH73247; GLYMA_02G261800.
DR EnsemblPlants; KRH73248; KRH73248; GLYMA_02G261800.
DR GeneID; 100785036; -.
DR Gramene; KRH73246; KRH73246; GLYMA_02G261800.
DR Gramene; KRH73247; KRH73247; GLYMA_02G261800.
DR Gramene; KRH73248; KRH73248; GLYMA_02G261800.
DR KEGG; gmx:100785036; -.
DR InParanoid; A0A0R0LBQ6; -.
DR OMA; SDQFYRW; -.
DR OrthoDB; 391749at2759; -.
DR Proteomes; UP000008827; Chromosome 2.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:0080188; P:gene silencing by RNA-directed DNA methylation; IEA:InterPro.
DR CDD; cd18007; DEXHc_ATRX-like; 1.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR044567; CLSY/DRD1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45821:SF2; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2; 1.
DR PANTHER; PTHR45821; SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000008827}.
FT DOMAIN 754..954
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 1116..1280
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 268..291
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 508..531
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 569..594
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 674..702
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 569..585
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 674..697
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1310 AA; 150206 MW; EF69E15F5F2808D2 CRC64;
MAHRKRRLDQ LKHPFSPHPF EAVAFGSWQA VEFIKIEAGT MSMHFADNHH VVMEKGPLSD
IRIRSRKATL PDCSRFLRPG IDVCVLSAPQ QSDDADAGIN LDPVWTDAKI SSVQRKPHDS
ECSCQFYVNF YVHQGSLGAE LRTLNKEIKV VGINQISILQ KLESTPCENQ HYRWASSEDC
SIISHTKLLL GKVLCDLSWL VVTTALKKKV SFCVRSLEDK LVYQVLERDT TVSTSLNNES
HIDVVNFKTE KGTLFSIVSQ VATLKTKRVE PEQESHEDKE SPSYNVEGLR RSKRRNVQPE
RYLGCEKVSQ IDVGSFRNLP PVKINTWKDD DVDHEMNIPL AGLFSLQKKF LEGDTDNHQK
VKKASSCREL VVYQRKKTKS QKVKSGGDDQ NEHQNHLAII ALPAQHDPVE VIHCDDLNDK
VTRSYGHESS EVSSKYRHLI GTTSKKNDIK LLTFESHNHA AKSDDADKID DLSSRYHYSY
GTPKSQRMGL SDLDDMVDLG NKWEGISSSK GFQGKKQRTT YLRSRDHGEQ KRYNYKDRSL
NAAAYKDLIN SYLKNMNTRP TNEESAIADQ WKQSETPSNI GQKTETQMLD EEDAEEESEM
DMLWRELEVS LASCYLEEET EDSHAAVFTE TLENPNPGCP HDFRMNEEIG IYCYRCGFVS
TEIKYITPPF IQHSVRHQEE KQSPEEDSKT KPDEDDDIDL LPALDSPEKL VSQENENVWA
LIPELKAKLH AHQKKAFEFL WQNIAGSMDP ELMETASKRR GGCVISHTPG AGKTFLIIAF
LVSYLKLFPG KRPLVLAPKT TLYTWYKEFI KWDIPIPVYL IHGRRTYRVF KQKSSIVIPG
VPKPTDDVKH VLDCLEKIQK WHSHPSVLIM GYTSFLTLMR EDSKFAHRKY MAKVLRESPG
IMVLDEGHNP RSTKSRLRKV LMKVQTELRI LLSGTLFQNN FCEYFNTLCL ARPKFIHEVL
KALDSKYKRK GKVAKKASHL LESRARKFFL DQIAKKIDSN NGRERRQGLK MLRNVTNGFI
DVYEGRSSDG LPGLQIYTLL MNSTDTQHEI LHELHKKMAR VNGYPLELEL LITLGSIHPW
LVKSAVCAEK FFTPAQLMEL EKCKFDLRIG SKVKFVLSLI YRVVKKEKVL IFCHNIAPVK
LFVEYFEKYF GWTKGREVLV LSGELELFER GRVMDKFEEP GGVAKILLAS ITACAEGISL
TAASRVIMLD SEWNPSKTKQ AIARAFRPGQ QKVVYVYQLL VTGSLEEDKY KRTTWKEWVS
SMIFSEAFVE DPSQWQAEKI EDYILREMVA EDRSKSFHMI MKNEKTSTNK
//
