ID A0A0R1GIT4_9LACO Unreviewed; 307 AA.
AC A0A0R1GIT4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 24.
DE SubName: Full=Integrase core domain protein {ECO:0000313|EMBL:KRK33973.1};
GN ORFNames=FC07_GL000904 {ECO:0000313|EMBL:KRK33973.1};
OS Loigolactobacillus bifermentans DSM 20003.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Loigolactobacillus.
OX NCBI_TaxID=1423726 {ECO:0000313|EMBL:KRK33973.1, ECO:0000313|Proteomes:UP000051461};
RN [1] {ECO:0000313|EMBL:KRK33973.1, ECO:0000313|Proteomes:UP000051461}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 20003 {ECO:0000313|EMBL:KRK33973.1,
RC ECO:0000313|Proteomes:UP000051461};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRK33973.1}.
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DR EMBL; AZDA01000097; KRK33973.1; -; Genomic_DNA.
DR RefSeq; WP_057905303.1; NZ_AZDA01000097.1.
DR AlphaFoldDB; A0A0R1GIT4; -.
DR PATRIC; fig|1423726.3.peg.931; -.
DR OrthoDB; 9781678at2; -.
DR Proteomes; UP000051461; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR025246; IS30-like_HTH.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR NCBIfam; NF033563; transpos_IS30; 1.
DR PANTHER; PTHR10948; TRANSPOSASE; 1.
DR PANTHER; PTHR10948:SF23; TRANSPOSASE INSI FOR INSERTION SEQUENCE ELEMENT IS30A-RELATED; 1.
DR Pfam; PF13936; HTH_38; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000051461}.
FT DOMAIN 143..305
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
SQ SEQUENCE 307 AA; 35811 MW; 45C0FCBEEA03CC9E CRC64;
MGTTILSFQN RVVIETLHNE GHSLRYIANY LDFSKTTIFN ELHRLNSEYQ AGLAQTDFER
KVSQRGRKSS LTKNLKHLIE EKIQVQKWSP EQVAHVVGIA YKTVYNWIDQ GWLDIQLPDL
PDHGIRRHRA KEKRGTFNHG RSIEERPHKV ETRQEFGHFE ADTVLSGKRK GQAVATFVER
KSRLTIVKRL NGRDSTSMTK AILELANQLG DNLKTLTVDH GKEFANYNLI EEQAGVPLYF
AHAYSPHERG SNENRNRVLR RFIPKGQPID EITDDELIQI NWYLNSRPLK CLNWRTPIEI
FLRNLRY
//
