ID A0A0R1PJZ0_9LACO Unreviewed; 274 AA.
AC A0A0R1PJZ0;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE SubName: Full=Transcriptional regulator raffinose operon {ECO:0000313|EMBL:KRL30418.1};
GN ORFNames=FC94_GL001098 {ECO:0000313|EMBL:KRL30418.1};
OS Lactobacillus kefiranofaciens subsp. kefirgranum DSM 10550 = JCM 8572.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactobacillus.
OX NCBI_TaxID=1423828 {ECO:0000313|EMBL:KRL30418.1, ECO:0000313|Proteomes:UP000051071};
RN [1] {ECO:0000313|EMBL:KRL30418.1, ECO:0000313|Proteomes:UP000051071}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 10550 {ECO:0000313|EMBL:KRL30418.1,
RC ECO:0000313|Proteomes:UP000051071};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRL30418.1}.
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DR EMBL; AZEM01000021; KRL30418.1; -; Genomic_DNA.
DR RefSeq; WP_013855293.1; NZ_AZEM01000021.1.
DR AlphaFoldDB; A0A0R1PJZ0; -.
DR PATRIC; fig|1423828.4.peg.1147; -.
DR Proteomes; UP000051071; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd06986; cupin_MmsR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR020449; Tscrpt_reg_HTH_AraC-type.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR PRINTS; PR00032; HTHARAC.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51215; Regulatory protein AraC; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 175..274
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 274 AA; 31711 MW; E11A3F013FB0FB23 CRC64;
MPNQFHNLTN PEIDSHILFY GQQQCQPDEY FEGDNLRKND VLYYVIKGTG SFLSSGHHEV
KLKTGDLFLV PRSRTCSFQA DHSNPWEYLW IGLTGSDTGK ILKASNLPNK NFLRQIQNTK
FFSTLTELYG VLNKKKTLLN HLQIASLTYQ LFYHLVSEFP DHPPVRKIPK NDQYQIAINY
LNKNYTDPTC NIIELCNRLG VSRSFLYSLF RKNTKISPQK YLMKLRMEAA KKELTSTTHN
LKEVAKKVGY GDEFTFSKAF KRYSGVSPNV FRGN
//
