ID A0A0R1SCC4_9LACO Unreviewed; 262 AA.
AC A0A0R1SCC4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE SubName: Full=RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:KRL63715.1};
GN ORFNames=FC85_GL001518 {ECO:0000313|EMBL:KRL63715.1};
OS Lentilactobacillus diolivorans DSM 14421.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lentilactobacillus.
OX NCBI_TaxID=1423739 {ECO:0000313|EMBL:KRL63715.1, ECO:0000313|Proteomes:UP000052013};
RN [1] {ECO:0000313|EMBL:KRL63715.1, ECO:0000313|Proteomes:UP000052013}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 14421 {ECO:0000313|EMBL:KRL63715.1,
RC ECO:0000313|Proteomes:UP000052013};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRL63715.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AZEY01000101; KRL63715.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R1SCC4; -.
DR STRING; 1423739.FC85_GL001518; -.
DR PATRIC; fig|1423739.3.peg.1591; -.
DR Proteomes; UP000052013; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd00165; S4; 1.
DR Gene3D; 3.30.1370.160; -; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.10.290.10; RNA-binding S4 domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR002942; S4_RNA-bd.
DR InterPro; IPR036986; S4_RNA-bd_sf.
DR InterPro; IPR048443; YlmH_N.
DR InterPro; IPR040591; YlmH_RBD.
DR Pfam; PF01479; S4; 1.
DR Pfam; PF21278; YlmH_1st; 1.
DR Pfam; PF17774; YlmH_RBD; 1.
DR SMART; SM00363; S4; 1.
DR SUPFAM; SSF55174; Alpha-L RNA-binding motif; 1.
DR PROSITE; PS50889; S4; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000052013};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00182}.
FT DOMAIN 183..243
FT /note="RNA-binding S4"
FT /evidence="ECO:0000259|SMART:SM00363"
SQ SEQUENCE 262 AA; 29688 MW; D9EEB9509DE29CE2 CRC64;
MESNVSQHYR PDELPFLESI DNLSGRVQNE YRPILTNFLN PRQLYILETI VNRYDGITFK
TFGGYPNAEM KRAIAFPDYF TPTADDFQIT AFQIDYPTKF ATLSHGQILG SVMGAGIDRD
VIGDIISDGL TWQFLCENEM ADYLRAQVDR IGKIKIKLKT ISPEEIIVPI DESESATTTV
SSLRVDALIS EGFHISRHHA KELVDGGFVR INWVQTDRPD LELSIQDIIS VRGHGRIIIK
EIAGVTKKGK IRIVINVYNR NK
//
