ID A0A0R1ZEY2_9LACO Unreviewed; 776 AA.
AC A0A0R1ZEY2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 23.
DE RecName: Full=Single-stranded-DNA-specific exonuclease RecJ {ECO:0000256|ARBA:ARBA00019841};
GN ORFNames=FC64_GL000592 {ECO:0000313|EMBL:KRM53309.1};
OS Ligilactobacillus araffinosus DSM 20653.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Ligilactobacillus.
OX NCBI_TaxID=1423820 {ECO:0000313|EMBL:KRM53309.1, ECO:0000313|Proteomes:UP000051291};
RN [1] {ECO:0000313|EMBL:KRM53309.1, ECO:0000313|Proteomes:UP000051291}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 20653 {ECO:0000313|EMBL:KRM53309.1,
RC ECO:0000313|Proteomes:UP000051291};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC -!- SIMILARITY: Belongs to the RecJ family.
CC {ECO:0000256|ARBA:ARBA00005915}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM53309.1}.
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DR EMBL; AYYZ01000004; KRM53309.1; -; Genomic_DNA.
DR RefSeq; WP_057906088.1; NZ_AYYZ01000004.1.
DR AlphaFoldDB; A0A0R1ZEY2; -.
DR STRING; 1423820.FC64_GL000592; -.
DR PATRIC; fig|1423820.4.peg.600; -.
DR Proteomes; UP000051291; Unassembled WGS sequence.
DR GO; GO:0008409; F:5'-3' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR Gene3D; 3.10.310.30; -; 1.
DR Gene3D; 3.90.1640.30; -; 1.
DR InterPro; IPR001667; DDH_dom.
DR InterPro; IPR038763; DHH_sf.
DR InterPro; IPR003156; DHHA1_dom.
DR InterPro; IPR004610; RecJ.
DR InterPro; IPR018779; RecJ_C.
DR InterPro; IPR041122; RecJ_OB.
DR NCBIfam; TIGR00644; recJ; 1.
DR PANTHER; PTHR30255; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR PANTHER; PTHR30255:SF2; SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ; 1.
DR Pfam; PF01368; DHH; 1.
DR Pfam; PF02272; DHHA1; 1.
DR Pfam; PF17768; RecJ_OB; 1.
DR Pfam; PF10141; ssDNA-exonuc_C; 1.
DR SUPFAM; SSF64182; DHH phosphoesterases; 1.
PE 3: Inferred from homology;
KW Exonuclease {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:KRM53309.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022839, ECO:0000313|EMBL:KRM53309.1};
KW Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW Reference proteome {ECO:0000313|Proteomes:UP000051291}.
FT DOMAIN 84..228
FT /note="DDH"
FT /evidence="ECO:0000259|Pfam:PF01368"
FT DOMAIN 319..435
FT /note="DHHA1"
FT /evidence="ECO:0000259|Pfam:PF02272"
FT DOMAIN 456..563
FT /note="RecJ OB"
FT /evidence="ECO:0000259|Pfam:PF17768"
FT DOMAIN 579..769
FT /note="Single-stranded-DNA-specific exonuclease RecJ C-
FT terminal"
FT /evidence="ECO:0000259|Pfam:PF10141"
SQ SEQUENCE 776 AA; 86520 MW; 9D68903E3D404F28 CRC64;
MITSNYDWKL AVSKLDDGQI NELAQTLHHS PLLIKILAQR GLENANQIKD FLEPQGQHVH
DPYLLYDMEK AIDRIQQAII ENQKIFIYGD YDADGITSTA VMYETLLQLG ANVHYFVPDR
FKDGYGPNLS EYQNLEKQGM QLLVTVDNGV SGYDEVQYLM DKGIDVIITD HHELPAKLPP
AYAIVHPMHP KGNYPFKGLA GVGVAFKVAC ALLDDIPQEE LDLVAIGTVA DVMSLTDENR
DLVSFGIEEL KTTMRPGLSA LLEVTKTKPD EIDSDTIGFT IAPRLNSLGR LENASLGVKL
LTTLDETEAA QLAQHTHDLN QQRQTLVATI TKEAEQILNQ TGQSHLVNVI AGKNWHEGVL
GIVASRITEE TKRPTIVLTL TEDNLYKGSG RSVEGFNLFE AFDSHRKLFE SFGGHAQACG
LSIKPDNLAG FQVIADQEAE NQHFKGDKRP VLEINEELPA ASISLDLINE LNLLAPFGCD
NPRPVFKITG IQNPQLKVMG DQGQHFRIDF QTGHGSLAGV KFNASPAEIH QLQAEHLDGI
AIVGELTVNR WQGRTTPQIQ ICDLKDETGN EVNDFKLKVI DQRFISSPNK FNSEFVYGFF
NVKLLKQVAA QVASNIKLIS LNDQVPITGD TLVIVDCPPS IAAFESLIDR LQVKQIVLKC
YTQHNIASKP LPSRQDFGKL YRFTSTHHDV DLRKDLEKLA NYLNFDKESL VFMIQVFSEA
KFVKIKNGLL TGTPSNQRIE LTKTKRYQAR VAQIQAQQLF LNAKTADLLK RLDLTI
//
