ID A0A0R2AMV2_9LACO Unreviewed; 179 AA.
AC A0A0R2AMV2;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE RecName: Full=RNA polymerase sigma-70 region 2 domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=FD06_GL001390 {ECO:0000313|EMBL:KRM68176.1};
OS Apilactobacillus ozensis DSM 23829 = JCM 17196.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Apilactobacillus.
OX NCBI_TaxID=1423781 {ECO:0000313|EMBL:KRM68176.1, ECO:0000313|Proteomes:UP000052012};
RN [1] {ECO:0000313|EMBL:KRM68176.1, ECO:0000313|Proteomes:UP000052012}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 23829 {ECO:0000313|EMBL:KRM68176.1,
RC ECO:0000313|Proteomes:UP000052012};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein.
CC {ECO:0000256|ARBA:ARBA00024764}.
CC -!- SIMILARITY: Belongs to the UPF0122 family.
CC {ECO:0000256|ARBA:ARBA00008720}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM68176.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AYYQ01000030; KRM68176.1; -; Genomic_DNA.
DR RefSeq; WP_056966277.1; NZ_AYYQ01000030.1.
DR AlphaFoldDB; A0A0R2AMV2; -.
DR STRING; 1423781.FD06_GL001390; -.
DR PATRIC; fig|1423781.4.peg.1438; -.
DR OrthoDB; 2248780at2; -.
DR Proteomes; UP000052012; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000052012}.
SQ SEQUENCE 179 AA; 20983 MW; 0450A2DC7E7ADDB9 CRC64;
MNKNENNDYQ ASFKYLMAND HQVLIYGVLK KLNIRPFNQL YDDLYQEGVL AFIKKYNQCP
ADKTDKQRLG FIYQGVYWQL LDYLRKDSLV GTRQENDDTE LAYLSASDDS NALIEKKLLL
QKLQTICTKK ELSYLYNKHE LGMSVTELAE QENISRQSMH KRLKKLHQKI KLNLGVTHG
//
