ID A0A0R2CA27_9LACO Unreviewed; 114 AA.
AC A0A0R2CA27;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 25.
DE RecName: Full=UPF0122 protein FD19_GL000520 {ECO:0000256|HAMAP-Rule:MF_00245};
GN ORFNames=FD19_GL000520 {ECO:0000313|EMBL:KRM88229.1};
OS Lacticaseibacillus thailandensis DSM 22698 = JCM 13996.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lacticaseibacillus.
OX NCBI_TaxID=1423810 {ECO:0000313|EMBL:KRM88229.1, ECO:0000313|Proteomes:UP000051789};
RN [1] {ECO:0000313|EMBL:KRM88229.1, ECO:0000313|Proteomes:UP000051789}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22698 {ECO:0000313|EMBL:KRM88229.1,
RC ECO:0000313|Proteomes:UP000051789};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- FUNCTION: Might take part in the signal recognition particle (SRP)
CC pathway. This is inferred from the conservation of its genetic
CC proximity to ftsY/ffh. May be a regulatory protein.
CC {ECO:0000256|ARBA:ARBA00024764, ECO:0000256|HAMAP-Rule:MF_00245}.
CC -!- SIMILARITY: Belongs to the UPF0122 family.
CC {ECO:0000256|ARBA:ARBA00008720, ECO:0000256|HAMAP-Rule:MF_00245}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM88229.1}.
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DR EMBL; AYZK01000001; KRM88229.1; -; Genomic_DNA.
DR RefSeq; WP_054749503.1; NZ_BBER01000001.1.
DR AlphaFoldDB; A0A0R2CA27; -.
DR STRING; 1423810.FD19_GL000520; -.
DR PATRIC; fig|1423810.4.peg.532; -.
DR OrthoDB; 6392at2; -.
DR Proteomes; UP000051789; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR HAMAP; MF_00245; UPF0122; 1.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR007394; UPF0122.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR40083; UPF0122 PROTEIN CBO2450/CLC_2298; 1.
DR PANTHER; PTHR40083:SF1; UPF0122 PROTEIN CBO2450_CLC_2298; 1.
DR Pfam; PF04297; UPF0122; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000313|EMBL:KRM88229.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000051789}.
SQ SEQUENCE 114 AA; 13176 MW; CC94ED8C61AD3D93 CRC64;
MELAKTNRMN SLFDFYHGLL TAKQQEYLEL YYGDDYSLGE IAEEFGVSRQ AVYDNIRRSA
AALEEYERQL HMLADFEAQN AAVDALGAYV RSHYADDQEL QQLLARVENR VAEE
//
