ID A0A0R2CQU4_9LACO Unreviewed; 725 AA.
AC A0A0R2CQU4;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Transcription accessory protein {ECO:0000313|EMBL:KRM90486.1};
GN ORFNames=FC80_GL001391 {ECO:0000313|EMBL:KRM90486.1};
OS Liquorilactobacillus cacaonum DSM 21116.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Liquorilactobacillus.
OX NCBI_TaxID=1423729 {ECO:0000313|EMBL:KRM90486.1, ECO:0000313|Proteomes:UP000051131};
RN [1] {ECO:0000313|EMBL:KRM90486.1, ECO:0000313|Proteomes:UP000051131}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 21116 {ECO:0000313|EMBL:KRM90486.1,
RC ECO:0000313|Proteomes:UP000051131};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRM90486.1}.
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DR EMBL; AYZE01000015; KRM90486.1; -; Genomic_DNA.
DR RefSeq; WP_057829600.1; NZ_AYZE01000015.1.
DR AlphaFoldDB; A0A0R2CQU4; -.
DR STRING; 1423729.FC80_GL001391; -.
DR PATRIC; fig|1423729.3.peg.1412; -.
DR OrthoDB; 9804714at2; -.
DR Proteomes; UP000051131; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000051131}.
FT DOMAIN 651..720
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 725 AA; 81452 MW; 99B6D587CCB5C456 CRC64;
MNKQILERIA KKLNLKYMQV EATAKMYEEG ATVPFMARYR KEKTGNLDEV QIREILSNNQ
LMEKIEKRRT DVLNTIEEQE KLTPSLKKRI LEASTTQEIE DLYLPFKKKR KTRAMLAKEA
GLEPFAKWLL SSEAAEVQKK AQKFINTKQG ILDEKLAIIG ACDILAEEIS DNALYRTRIR
QITKQIGKIV TKPKKIEEDE QQIFKNYYEF SAEYKRIANH QILALNRAER LGIIGISIQV
DELQILNYLS AKIIRSNNSE VVTILKEAIT DGYKRLIKPA IERELRTELT QRANVHAIEV
FGDNLYHLLM QSPLKGKRIL GFDPAYRTGC KLAVVNETGK FISKAIIYPH RQKNALQGDE
NWNKALSEFI SILEKNKVDV VAIGNGTASR ESEIFVAEAV KKAKKSVVYV IVNEAGASVY
SASELARKEF PDFHVEERSA VSIARRLQDP LAELVKIDPK AIGVGQYQHD LPQKELDGKL
EDVIETAVNQ VGIDLNTASP QLLANVSGLS ATIANNIVDY RNEIGMFSQR SQLKKVPRLG
PKAYEQAAGF LRIIEGKNLL DNTDIHPESY QVAKNLLNEC GLTVASLGTT VSINKLKTVD
INQMAEKLAI GEATLKDIVE SLIKPGRDIR AELPPVLLRS DVLKIADLKP GMKLKGTVRN
VIDFGAFIDI GVKQDGLVHL SQLRRGFVKN PNDVIAVGDI VDVWVLSIDE QRKRIQLTMI
SPEEG
//
