ID A0A0R2JYK3_9LACO Unreviewed; 332 AA.
AC A0A0R2JYK3;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 22.
DE RecName: Full=CRISPR system Cms protein Csm5 {ECO:0000256|ARBA:ARBA00016113};
DE AltName: Full=CRISPR type III A-associated protein Csm5 {ECO:0000256|ARBA:ARBA00031720};
GN ORFNames=IV43_GL001637 {ECO:0000313|EMBL:KRN82319.1};
OS Ligilactobacillus acidipiscis.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Ligilactobacillus.
OX NCBI_TaxID=89059 {ECO:0000313|EMBL:KRN82319.1, ECO:0000313|Proteomes:UP000051491};
RN [1] {ECO:0000313|EMBL:KRN82319.1, ECO:0000313|Proteomes:UP000051491}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15353 {ECO:0000313|EMBL:KRN82319.1,
RC ECO:0000313|Proteomes:UP000051491};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- FUNCTION: This subunit might be involved in maturation of a crRNA
CC intermediate to its mature form. {ECO:0000256|ARBA:ARBA00003088}.
CC -!- SIMILARITY: Belongs to the CRISPR-associated Csm5 family.
CC {ECO:0000256|ARBA:ARBA00006680}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRN82319.1}.
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DR EMBL; JQBK01000052; KRN82319.1; -; Genomic_DNA.
DR RefSeq; WP_010496924.1; NZ_JQBK01000052.1.
DR AlphaFoldDB; A0A0R2JYK3; -.
DR PATRIC; fig|89059.3.peg.1747; -.
DR Proteomes; UP000051491; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-KW.
DR InterPro; IPR010173; CRISPR-assoc_Csm5.
DR InterPro; IPR005537; RAMP_III_fam.
DR NCBIfam; TIGR01899; cas_TM1807_csm5; 1.
DR PANTHER; PTHR38007; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR PANTHER; PTHR38007:SF1; CRISPR SYSTEM CMS PROTEIN CSM5; 1.
DR Pfam; PF03787; RAMPs; 1.
PE 3: Inferred from homology;
KW Antiviral defense {ECO:0000256|ARBA:ARBA00023118};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
SQ SEQUENCE 332 AA; 38357 MW; 19B70A58DA9BFFD0 CRC64;
MKQLYKRYSF VLCTLAPVHV GNGDTYTQKE YIYENGHYYF PNMGSLYEEI QNHGPEVVKT
FKDFLMLNQN NNRRKPRLVD FLNDQRIAAR GFGGYQIDET MFESEKDQRG KINEISEFIK
DPYGSPYVPG SSLKGSLRTL VLNGKPNVKN DNELSSIFSN IYVSDSSPIS LEKLILCRKW
DYSGIKMEAK GLPVYRESLR PFTVIKFEIQ ACSNEAVEIL DNLSKIAESV YQHYHEFFLQ
EFSNKYIQNN VFAPMYLGAG SGLWTKTKID DVKLNRFKTG KYSMKRKGVL KLTKAPLVKY
KEKGEIHSLI QNNENFYEMG KSGFICRALE DN
//
