ID A0A0R2L2E1_9LACO Unreviewed; 482 AA.
AC A0A0R2L2E1;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE RecName: Full=LysM peptidoglycan-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=IV81_GL001680 {ECO:0000313|EMBL:KRN94037.1};
OS Pediococcus stilesii.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Pediococcus.
OX NCBI_TaxID=331679 {ECO:0000313|EMBL:KRN94037.1, ECO:0000313|Proteomes:UP000051859};
RN [1] {ECO:0000313|EMBL:KRN94037.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18001 {ECO:0000313|EMBL:KRN94037.1};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- SIMILARITY: Belongs to the peptidase C40 family.
CC {ECO:0000256|ARBA:ARBA00007074}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRN94037.1}.
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DR EMBL; JQBX01000008; KRN94037.1; -; Genomic_DNA.
DR RefSeq; WP_057802690.1; NZ_JQBX01000008.1.
DR AlphaFoldDB; A0A0R2L2E1; -.
DR STRING; 331679.IV81_GL001680; -.
DR PATRIC; fig|331679.3.peg.1717; -.
DR Proteomes; UP000051859; Unassembled WGS sequence.
DR CDD; cd00118; LysM; 2.
DR Gene3D; 3.90.1720.10; endopeptidase domain like (from Nostoc punctiforme); 1.
DR Gene3D; 3.10.350.10; LysM domain; 2.
DR InterPro; IPR018392; LysM_dom.
DR InterPro; IPR036779; LysM_dom_sf.
DR InterPro; IPR000064; NLP_P60_dom.
DR InterPro; IPR038765; Papain-like_cys_pep_sf.
DR PANTHER; PTHR47053; MUREIN DD-ENDOPEPTIDASE MEPH-RELATED; 1.
DR PANTHER; PTHR47053:SF1; MUREIN DD-ENDOPEPTIDASE MEPH-RELATED; 1.
DR Pfam; PF01476; LysM; 2.
DR Pfam; PF00877; NLPC_P60; 1.
DR SMART; SM00257; LysM; 2.
DR SUPFAM; SSF54001; Cysteine proteinases; 1.
DR SUPFAM; SSF54106; LysM domain; 2.
DR PROSITE; PS51782; LYSM; 2.
DR PROSITE; PS51935; NLPC_P60; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000051859};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Signal {ECO:0000256|ARBA:ARBA00022729, ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..20
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 21..482
FT /note="LysM peptidoglycan-binding domain-containing
FT protein"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5039265430"
FT DOMAIN 35..80
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 91..134
FT /note="LysM"
FT /evidence="ECO:0000259|PROSITE:PS51782"
FT DOMAIN 361..482
FT /note="NlpC/P60"
FT /evidence="ECO:0000259|PROSITE:PS51935"
FT REGION 313..337
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 482 AA; 48261 MW; C0236BAEABA42C38 CRC64;
MVTNSKSNAS KLLLAGVAGA GMLVAGGSQV IAHADSVKVQ KSDTVWALSQ KYGVSIKSIE
SLNNINQNSH LIYVGQKIDI PEKTNSDSKV TEVTVKSGDS LSLLAEKYGS SVNAIMKANN
LKSSLILVGQ TLKIPATNET TVAPSTTATY VPQATQQTTV TTTVQQPVVQ ASSAAVAQPV
TQAPSSTATY VAPSSAAPSS ATTYVTSSVA PSSVAPSSAA TYVASSAAPS SVAPSSVATQ
QVSSAAPSSA SSYVASSVAP SQAPSSVASS HATTNAGYAA ASSVAPSSAT TNQVASSAAP
SSSASYVSSS QAPSSAVSNA NNTTHVSSAA PSYATSNSSS AVNTSSVASS AATSSSATTV
TQDTSSVTAL ASSLANNTIP YVWGGKTTSG FDCSGFVSYV YQHAAGISLP SYTVAMESYV
TKESVSAAQP GDLLFWGSAG STYHVAIYLG NNQYANAPTF GQNVKVSTLS SYFYPSFAGR
VK
//
