ID A0A0R2N5U6_9LACO Unreviewed; 731 AA.
AC A0A0R2N5U6;
DT 20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT 20-JAN-2016, sequence version 1.
DT 24-JAN-2024, entry version 27.
DE SubName: Full=S1 domain RNA-binding protein {ECO:0000313|EMBL:KRO18410.1};
GN ORFNames=IV56_GL001544 {ECO:0000313|EMBL:KRO18410.1};
OS Lacticaseibacillus saniviri JCM 17471 = DSM 24301.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lacticaseibacillus.
OX NCBI_TaxID=1293598 {ECO:0000313|EMBL:KRO18410.1, ECO:0000313|Proteomes:UP000050969};
RN [1] {ECO:0000313|EMBL:KRO18410.1, ECO:0000313|Proteomes:UP000050969}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 24301 {ECO:0000313|EMBL:KRO18410.1,
RC ECO:0000313|Proteomes:UP000050969};
RX PubMed=26415554; DOI=10.1038/ncomms9322;
RA Sun Z., Harris H.M., McCann A., Guo C., Argimon S., Zhang W., Yang X.,
RA Jeffery I.B., Cooney J.C., Kagawa T.F., Liu W., Song Y., Salvetti E.,
RA Wrobel A., Rasinkangas P., Parkhill J., Rea M.C., O'Sullivan O., Ritari J.,
RA Douillard F.P., Paul Ross R., Yang R., Briner A.E., Felis G.E.,
RA de Vos W.M., Barrangou R., Klaenhammer T.R., Caufield P.W., Cui Y.,
RA Zhang H., O'Toole P.W.;
RT "Expanding the biotechnology potential of lactobacilli through comparative
RT genomics of 213 strains and associated genera.";
RL Nat. Commun. 6:8322-8322(2015).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRO18410.1}.
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DR EMBL; JQCE01000005; KRO18410.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0R2N5U6; -.
DR STRING; 1293598.IV56_GL001544; -.
DR PATRIC; fig|1293598.4.peg.1609; -.
DR Proteomes; UP000050969; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd05685; S1_Tex; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR Gene3D; 1.10.10.650; RuvA domain 2-like; 1.
DR Gene3D; 1.10.3500.10; Tex N-terminal region-like; 1.
DR Gene3D; 1.10.150.310; Tex RuvX-like domain-like; 1.
DR Gene3D; 3.30.420.140; YqgF/RNase H-like domain; 1.
DR InterPro; IPR041692; HHH_9.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR010994; RuvA_2-like.
DR InterPro; IPR003029; S1_domain.
DR InterPro; IPR044146; S1_Tex.
DR InterPro; IPR023323; Tex-like_dom_sf.
DR InterPro; IPR023319; Tex-like_HTH_dom_sf.
DR InterPro; IPR018974; Tex-like_N.
DR InterPro; IPR032639; Tex_YqgF.
DR InterPro; IPR006641; YqgF/RNaseH-like_dom.
DR InterPro; IPR037027; YqgF/RNaseH-like_dom_sf.
DR PANTHER; PTHR10724; 30S RIBOSOMAL PROTEIN S1; 1.
DR PANTHER; PTHR10724:SF10; S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; 1.
DR Pfam; PF12836; HHH_3; 1.
DR Pfam; PF17674; HHH_9; 1.
DR Pfam; PF00575; S1; 1.
DR Pfam; PF09371; Tex_N; 1.
DR Pfam; PF16921; Tex_YqgF; 1.
DR SMART; SM00316; S1; 1.
DR SMART; SM00732; YqgFc; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF47781; RuvA domain 2-like; 2.
DR SUPFAM; SSF158832; Tex N-terminal region-like; 1.
DR PROSITE; PS50126; S1; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000050969}.
FT DOMAIN 657..726
FT /note="S1 motif"
FT /evidence="ECO:0000259|PROSITE:PS50126"
SQ SEQUENCE 731 AA; 81392 MW; 9A4D69473A5B1D53 CRC64;
MMRQKKLVDN QTVKLVQQQV TGINPHQITT VLDLMNDGNT VPFIARYRKE MTGSLDEVQI
QTIEEAFKRV TALQDRKAAV IKSIAEQGAL TPELEHQIQT SAKLQDVEDI YLPYKQKRQT
KAMVAKSRGL EPFAQWIMSF PSGALNAEAQ RYVNPENEIT SVDDVLDGAH EILAETFSEV
ATIRNWVRGY TMRTGKISAT VKPKGKDLDE KGVYQQYYDF EEAVSKMTST RTMAINRGEK
EKILSVKVKV DTDAIMNYFH FRLIDKRPDT EATAFIVAAY QDAYKRFVGP AIEREVRSSL
TADAEAKSIK VFGQNLYNLL MQAPIKGKVV LGFDPAYRTG CKLAVVDENG KFLAKAVIYP
HKPAPEKKRQ AAAQEFIDLL EQYQVTMIAI GNGTASRESE LFVADTLKRI NRDIFYVIVN
EAGASVYSAS QEARDEFPDL QVEQRSAISI ARRLQDPLAE LVKIDPESVG VGQYQHDLPA
KDLSNEVDAV VERAVNQVGV NLNTASYQLL TRISGLSKTI ATNIVTYRDE NGRYNSRTEL
KKVPRLGPKA FEQSVGFLRI IGGVHALDNT DIHPESYAVA RKILKMAGLK ESDLGDTTAM
AKIRQVDTKS LVDSGVGAET ITDIIASLQH PGRDLRDSMA APILRTDVLT MADLKVGMKL
EGTVRNVVDF GAFVDIGVKH DGLVHLSKMA HQYVRDPNTV VAIGDIVEVW IDSVDLKRER
IQLTMVDPKK G
//
