ID   A0A0R3CQM7_9BRAD        Unreviewed;       307 AA.
AC   A0A0R3CQM7;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   27-MAR-2024, entry version 36.
DE   SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:KRQ00043.1};
GN   ORFNames=AOQ71_40515 {ECO:0000313|EMBL:KRQ00043.1};
OS   Bradyrhizobium manausense.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Bradyrhizobium.
OX   NCBI_TaxID=989370 {ECO:0000313|EMBL:KRQ00043.1, ECO:0000313|Proteomes:UP000051936};
RN   [1] {ECO:0000313|EMBL:KRQ00043.1, ECO:0000313|Proteomes:UP000051936}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=BR3351 {ECO:0000313|EMBL:KRQ00043.1,
RC   ECO:0000313|Proteomes:UP000051936};
RA   De Araujo J.L., Zilli J.E.;
RT   "Draft Genome Sequence of Bradyrhizobium manausense Strain BR 3351T, a
RT   Novel Symbiotic Nitrogen-Fixing Alphaproteobacterium Isolated from
RT   Brazilian Amazon Rain Forest.";
RL   Submitted (SEP-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: NodD regulates the expression of the nodABCFE genes which
CC       encode other nodulation proteins. NodD is also a negative regulator of
CC       its own expression. Binds flavonoids as inducers.
CC       {ECO:0000256|ARBA:ARBA00003502}.
CC   -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC       {ECO:0000256|ARBA:ARBA00009437}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRQ00043.1}.
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DR   EMBL; LJYG01000116; KRQ00043.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0R3CQM7; -.
DR   STRING; 989370.AOQ71_40515; -.
DR   OrthoDB; 8339333at2; -.
DR   Proteomes; UP000051936; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR   Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR005119; LysR_subst-bd.
DR   InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   InterPro; IPR036390; WH_DNA-bd_sf.
DR   InterPro; IPR037402; YidZ_PBP2.
DR   PANTHER; PTHR30118:SF6; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO; 1.
DR   PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR   Pfam; PF00126; HTH_1; 1.
DR   Pfam; PF03466; LysR_substrate; 1.
DR   PRINTS; PR00039; HTHLYSR.
DR   SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR   SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR   PROSITE; PS50931; HTH_LYSR; 1.
PE   3: Inferred from homology;
KW   Activator {ECO:0000256|ARBA:ARBA00023159};
KW   Nodulation {ECO:0000256|ARBA:ARBA00022458};
KW   Repressor {ECO:0000256|ARBA:ARBA00022491}.
FT   DOMAIN          8..65
FT                   /note="HTH lysR-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50931"
SQ   SEQUENCE   307 AA;  34010 MW;  C2A724E8405E0295 CRC64;
     MSVSFRALDL NLLKVFEALM TEGSVTRAAS ALTMTQPAVS NALARLRDAL GDPLFVRSGT
     GIRPTQRAVV LWEPIGEALE SVRSALDEQV FDPARAQTEF TLSMSDYVAS LVMPNLLNHL
     GEIAPKTRVH TVPNTILEIA DQLEGNRVDC VLSVYVNEAQ QPTAIRSRSL WTVDYACFMR
     RGHPLAAQKR LSTRAFLNAG HVDVTLAGKR APTYDLFLAS RGLSRNLVAT VNHYSAAYEI
     VRQTDLIAVL PSDLRSQSRH APFLHAMPLP LKAPARIVSL FWHQRNDTVP AQRWLRETLV
     GMFAKSE
//