GenomeNet

Database: UniProt
Entry: A0A0R4ITA3_DANRE
LinkDB: A0A0R4ITA3_DANRE
Original site: A0A0R4ITA3_DANRE 
ID   A0A0R4ITA3_DANRE        Unreviewed;       504 AA.
AC   A0A0R4ITA3;
DT   20-JAN-2016, integrated into UniProtKB/TrEMBL.
DT   20-JAN-2016, sequence version 1.
DT   28-MAR-2018, entry version 9.
DE   SubName: Full=Ribosomal RNA adenine dimethylase domain-containing 1 {ECO:0000313|Ensembl:ENSDARP00000139146};
GN   Name=rrnad1 {ECO:0000313|Ensembl:ENSDARP00000139146,
GN   ECO:0000313|ZFIN:ZDB-GENE-050522-515};
OS   Danio rerio (Zebrafish) (Brachydanio rerio).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC   Cyprinidae; Danio.
OX   NCBI_TaxID=7955 {ECO:0000313|Ensembl:ENSDARP00000139146, ECO:0000313|Proteomes:UP000000437};
RN   [1] {ECO:0000313|Ensembl:ENSDARP00000139146, ECO:0000313|Proteomes:UP000000437}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000139146,
RC   ECO:0000313|Proteomes:UP000000437};
RX   PubMed=23594743; DOI=10.1038/nature12111;
RA   Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C.,
RA   Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L.,
RA   McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C.,
RA   Koch R., Rauch G.J., White S., Chow W., Kilian B., Quintais L.T.,
RA   Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T.,
RA   Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F.,
RA   Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H.,
RA   Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M.,
RA   Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J.,
RA   Clee C., Oliver K., Clark R., Riddle C., Elliot D., Threadgold G.,
RA   Harden G., Ware D., Begum S., Mortimore B., Kerry G., Heath P.,
RA   Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J.,
RA   Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P.,
RA   Barker N., Lloyd C., Stevens C., Harley J., Holt K., Panagiotidis G.,
RA   Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D.,
RA   Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K.,
RA   Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C.,
RA   Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J.,
RA   Murnane C., Gray E., Humphries M., Sycamore N., Barker D.,
RA   Saunders D., Wallis J., Babbage A., Hammond S.,
RA   Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A.,
RA   Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J.,
RA   Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E.,
RA   Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D.,
RA   Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z.,
RA   Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J.,
RA   Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Lanz C.,
RA   Raddatz G., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C.,
RA   Yang F., Schuster S.C., Carter N.P., Harrow J., Ning Z., Herrero J.,
RA   Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C.,
RA   Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H.,
RA   Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J.,
RA   Stemple D.L.;
RT   "The zebrafish reference genome sequence and its relationship to the
RT   human genome.";
RL   Nature 496:498-503(2013).
RN   [2] {ECO:0000313|Ensembl:ENSDARP00000139146}
RP   IDENTIFICATION.
RC   STRAIN=Tuebingen {ECO:0000313|Ensembl:ENSDARP00000139146};
RG   Ensembl;
RL   Submitted (NOV-2015) to UniProtKB.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; AL954306; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   Ensembl; ENSDART00000168856; ENSDARP00000139146; ENSDARG00000089033.
DR   ZFIN; ZDB-GENE-050522-515; rrnad1.
DR   GeneTree; ENSGT00530000063745; -.
DR   Proteomes; UP000000437; Chromosome 16.
DR   ExpressionAtlas; A0A0R4ITA3; baseline.
DR   GO; GO:0000179; F:rRNA (adenine-N6,N6-)-dimethyltransferase activity; IEA:InterPro.
DR   InterPro; IPR025714; Methyltranfer_dom.
DR   InterPro; IPR020596; rRNA_Ade_Mease_Trfase_CS.
DR   InterPro; IPR029063; SAM-dependent_MTases.
DR   Pfam; PF13679; Methyltransf_32; 1.
DR   SUPFAM; SSF53335; SSF53335; 1.
DR   PROSITE; PS01131; RRNA_A_DIMETH; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000000437};
KW   Reference proteome {ECO:0000313|Proteomes:UP000000437}.
FT   DOMAIN       75    305       Methyltranfer_dom. {ECO:0000259|Pfam:
FT                                PF13679}.
SQ   SEQUENCE   504 AA;  55802 MW;  DEB6C98AED5AC985 CRC64;
     MIADLLLDDK IKDSYSSVWP LSLLALRTAA HALTFPRTTP GGHQQNAGVA AEEFQSNHSQ
     SSLLGHIFRK HVKPKKQHEI RRLGMLVKEL CDQANCNCVV DVGSGQGHLT RFLSFGLGLH
     VTGIEADPNL VSMATKFDRQ LLQTLTKENQ SSGKAHVLRS EPGPPPRHVV GWVNPKASWD
     VFIQQLGMTA TESDSIGATT EKKQRVEDLH LEPLSCQTKA EDLQNTLHSQ KTASQTNTSI
     FPSGTATEML TCKTIPIPKR DPGSFVLTGL HACGDLSATL LRHFTNCPHV NVITSVACCY
     MKISTKENPN PPGVFQPPFF SDITTADFCS EFGYPMSNWV RGLTGHQLSY KAREGACHAI
     EEYLQRLREE STLLRTHCYR AILENIIRAH RPDIRRPGVQ TVKKAHMLSF SEYARLALPR
     VGLPADLPFD PVCVDAMLAQ QGKVVAYFSL VLLLAPVVET LVLLDRIIFL QERGFQSKLI
     PLFDAAFSPR NLVLVAVKSE ETRS
//
DBGET integrated database retrieval system