ID A0A0S2I0L9_9BACT Unreviewed; 794 AA.
AC A0A0S2I0L9;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 33.
DE RecName: Full=HAMP domain-containing protein {ECO:0000259|PROSITE:PS50885};
GN ORFNames=L21SP5_02254 {ECO:0000313|EMBL:ALO15887.1};
OS Salinivirga cyanobacteriivorans.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Salinivirgaceae;
OC Salinivirga.
OX NCBI_TaxID=1307839 {ECO:0000313|EMBL:ALO15887.1, ECO:0000313|Proteomes:UP000064893};
RN [1] {ECO:0000313|EMBL:ALO15887.1, ECO:0000313|Proteomes:UP000064893}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=L21-Spi-D4 {ECO:0000313|EMBL:ALO15887.1,
RC ECO:0000313|Proteomes:UP000064893};
RA Spring S., Bunk B., Sproer C., Klenk H.-P.;
RT "Description and complete genome sequence of a novel strain predominating
RT in hypersaline microbial mats and representing a new family of the
RT Bacteriodetes phylum.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP013118; ALO15887.1; -; Genomic_DNA.
DR RefSeq; WP_057953308.1; NZ_CP013118.1.
DR AlphaFoldDB; A0A0S2I0L9; -.
DR STRING; 1307839.L21SP5_02254; -.
DR KEGG; blq:L21SP5_02254; -.
DR OrthoDB; 1109395at2; -.
DR Proteomes; UP000064893; Chromosome.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd06225; HAMP; 1.
DR CDD; cd00130; PAS; 1.
DR CDD; cd12913; PDC1_MCP_like; 1.
DR CDD; cd12912; PDC2_MCP_like; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 3.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR45528; SENSOR HISTIDINE KINASE CPXA; 1.
DR PANTHER; PTHR45528:SF9; SENSOR HISTIDINE KINASE YRKQ; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00672; HAMP; 1.
DR Pfam; PF08448; PAS_4; 1.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00304; HAMP; 1.
DR SUPFAM; SSF55781; GAF domain-like; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}; Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000064893};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 325..347
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 348..402
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT COILED 619..667
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 794 AA; 90295 MW; 4977DB6E67C900DA CRC64;
MKVRMKLYVK MLLLILTTSF VIFGTSILVI GLQIKKNAYN KSVEYADLTA KVNARQIKGE
MQKYMSTAQG LNNFLLSFES LDSAARRANF MNILKYNLKK KTDILSLWTI WEPNTIDNFD
SLYINVKGNT YIGNFSPTYY KEGDSIKLEG LSSGPLFQGN YYTTPKTNRK QTLLAPYYYS
YGKGEAYAVL QTNMIVPLIY NGRFLGVIGA DASLDSLQKY AEQIKPFDES YAFLIAHDGS
IVAHRSSKWV GQKLDTLKYS KVTSEEILQN AQWNNNYSFT DVDPITGQET YFTMSPLTIG
KASERWVFGI AVPISELNSV AKNSFILSII AGLVALSVLS IFIYIIARSI TRPVTNITRV
LEEIAKGNIE TSLKVKGKYN DEINDMAQSV NKLIDGLNET AGFAKQIGEG NLDREHQLLS
KNDFLGQSLV DMRESLKEAR KFEEEKREKD RKQAWVTQGL AQFGEILRED NDDMQKFSVN
IAKNICEYME IPQCAIFIIE EDENESYFDL KAVHAFGSQK LIDKKVKEGE ELVGRAISEK
STIHLTNTPD SFATLTTGKT DDPAPNNLLI VPMLMNDEPF GLLELMGYEP FENHQIEFTE
KLAESIAATV SSVKTNIRTA QLLKQSEQLK DELSQQEEEM RQNLEEMQAT QEEAKKRESE
LSAIRNTLQN TTMMAEYDLD GRIIRINELM ANTYGHAAEH MIGKFQDAFV TQDDASRRGF
LKFWQEVISG VTKKRIHEIT KRDQTIYLSE TYIPIFEDEE IDRVLNIATD ITHKVKLDKE
ITQLMNKVSE LKNN
//
