ID A0A0S3RJ43_PHAAN Unreviewed; 567 AA.
AC A0A0S3RJ43;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Vigan.03G022000 {ECO:0000313|EMBL:BAT80627.1};
GN ORFNames=VIGAN_03022000 {ECO:0000313|EMBL:BAT80627.1};
OS Vigna angularis var. angularis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=157739 {ECO:0000313|EMBL:BAT80627.1, ECO:0000313|Proteomes:UP000291084};
RN [1] {ECO:0000313|EMBL:BAT80627.1, ECO:0000313|Proteomes:UP000291084}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shumari {ECO:0000313|Proteomes:UP000291084};
RX PubMed=26616024; DOI=10.1038/srep16780;
RA Sakai H., Naito K., Ogiso-Tanaka E., Takahashi Y., Iseki K., Muto C.,
RA Satou K., Teruya K., Shiroma A., Shimoji M., Hirano T., Itoh T., Kaga A.,
RA Tomooka N.;
RT "The power of single molecule real-time sequencing technology in the de
RT novo assembly of a eukaryotic genome.";
RL Sci. Rep. 5:16780-16780(2015).
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DR EMBL; AP015036; BAT80627.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0S3RJ43; -.
DR Proteomes; UP000291084; Chromosome 3.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd12458; RRM_AtC3H46_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 1.
DR InterPro; IPR034365; AtC3H46-like_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR025605; OST-HTH/LOTUS_dom.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR000571; Znf_CCCH.
DR InterPro; IPR036855; Znf_CCCH_sf.
DR PANTHER; PTHR24009; RNA-BINDING (RRM/RBD/RNP MOTIFS); 1.
DR PANTHER; PTHR24009:SF50; TRANSCRIPTION FACTOR C3H FAMILY-RELATED; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00642; zf-CCCH; 1.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00356; ZnF_C3H1; 1.
DR SUPFAM; SSF90229; CCCH zinc finger; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51644; HTH_OST; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS50103; ZF_C3H1; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000291084};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 201..228
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 252..334
FT /note="HTH OST-type"
FT /evidence="ECO:0000259|PROSITE:PS51644"
FT DOMAIN 353..428
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT ZN_FING 201..228
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT COILED 468..495
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 567 AA; 65153 MW; 09101CDA61DCD2DC CRC64;
MKKFRFLNIC CTVYLLLFYG DNIRVMDISH YTRIVFDKIH KFEPEHARKI IGYLLLQDHG
ELEMAKWASY PDCYIREVAF QAKRELLRLS AKPDILPISH MVNPQQGYGH LAIMSPRTPT
TPNFQVPPLY WDPQPAGNIN QDFMAMNYMD SVIELQKQTQ LCSLENRIDA VKTGTVGVAN
DYYRDASAAN LGGKAGKRFS EYPMKVCHYF NKGFCKHGNN CRFYHGQVAP ENLSQMYGSD
ASGEDQVISP GSLAQLEKEI IELLRSRDDA ISIASLPMAY YDRYKKVLQA DGYLTESQRH
GKSGYSLTKL LARLKNSIRL IVRPHGQHSV TLAEDAPTQM KKGEFPRNIS ASRQIYLTFP
ADSTFTEDDV SNYFNTFGPV ADVRIPNQQR RMFGFVTFAH SETVKTVLDK GNPHCVRGSR
VLVKPYREKA KINERKFTDR LEHTFCYSPH CVDTDSELNS TPRSLGNHKS FRRQLQEQEQ
ALEHERRSLA QLQFSSKPLS SSPHFGFSLD ETRVSDDHFN LQPPEESFRF PLHAKSIHTD
DNFSDEERYA FISLFYYILL PACFLIH
//
