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Database: UniProt
Entry: A0A0S3RSX3_PHAAN
LinkDB: A0A0S3RSX3_PHAAN
Original site: A0A0S3RSX3_PHAAN 
ID   A0A0S3RSX3_PHAAN        Unreviewed;       605 AA.
AC   A0A0S3RSX3;
DT   17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT   17-FEB-2016, sequence version 1.
DT   24-JAN-2024, entry version 25.
DE   RecName: Full=XPG-I domain-containing protein {ECO:0008006|Google:ProtNLM};
GN   Name=Vigan.04G090200 {ECO:0000313|EMBL:BAT83706.1};
GN   ORFNames=VIGAN_04090200 {ECO:0000313|EMBL:BAT83706.1};
OS   Vigna angularis var. angularis.
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC   NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX   NCBI_TaxID=157739 {ECO:0000313|EMBL:BAT83706.1, ECO:0000313|Proteomes:UP000291084};
RN   [1] {ECO:0000313|EMBL:BAT83706.1, ECO:0000313|Proteomes:UP000291084}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Shumari {ECO:0000313|Proteomes:UP000291084};
RX   PubMed=26616024; DOI=10.1038/srep16780;
RA   Sakai H., Naito K., Ogiso-Tanaka E., Takahashi Y., Iseki K., Muto C.,
RA   Satou K., Teruya K., Shiroma A., Shimoji M., Hirano T., Itoh T., Kaga A.,
RA   Tomooka N.;
RT   "The power of single molecule real-time sequencing technology in the de
RT   novo assembly of a eukaryotic genome.";
RL   Sci. Rep. 5:16780-16780(2015).
CC   -!- SIMILARITY: Belongs to the XPG/RAD2 endonuclease family. GEN subfamily.
CC       {ECO:0000256|ARBA:ARBA00038112}.
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DR   EMBL; AP015037; BAT83706.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0S3RSX3; -.
DR   Proteomes; UP000291084; Chromosome 4.
DR   GO; GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.
DR   CDD; cd09869; PIN_GEN1; 1.
DR   Gene3D; 1.10.150.20; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   Gene3D; 3.40.50.1010; 5'-nuclease; 1.
DR   InterPro; IPR036279; 5-3_exonuclease_C_sf.
DR   InterPro; IPR029060; PIN-like_dom_sf.
DR   InterPro; IPR006086; XPG-I_dom.
DR   InterPro; IPR006084; XPG/Rad2.
DR   InterPro; IPR006085; XPG_DNA_repair_N.
DR   PANTHER; PTHR11081; FLAP ENDONUCLEASE FAMILY MEMBER; 1.
DR   PANTHER; PTHR11081:SF59; FLAP ENDONUCLEASE GEN HOMOLOG 1; 1.
DR   Pfam; PF00867; XPG_I; 1.
DR   Pfam; PF00752; XPG_N; 1.
DR   PRINTS; PR00853; XPGRADSUPER.
DR   SMART; SM00484; XPGI; 1.
DR   SMART; SM00485; XPGN; 1.
DR   SUPFAM; SSF47807; 5' to 3' exonuclease, C-terminal subdomain; 1.
DR   SUPFAM; SSF88723; PIN domain-like; 1.
PE   3: Inferred from homology;
KW   Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW   Nuclease {ECO:0000256|ARBA:ARBA00022722};
KW   Reference proteome {ECO:0000313|Proteomes:UP000291084}.
FT   DOMAIN          1..97
FT                   /note="XPG N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00485"
FT   DOMAIN          128..198
FT                   /note="XPG-I"
FT                   /evidence="ECO:0000259|SMART:SM00484"
FT   REGION          518..605
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        518..533
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        534..557
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        558..582
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   605 AA;  68711 MW;  CE9F17854FF50179 CRC64;
     MGVGGNFWEL LKPYARREGF DFLRNKRVAV DLSFWIVQHE NAMKATHVRK PHLRLTFFRT
     INLFSKFGVL PVFIVDGTPS PLKAQARIAR YFGSCGIELT SLPVSEGVSA ERSSLFSSRV
     QECVELVKLL GMPVLQAKGE AEALCAQLNS EGHVDACITA DSDAFLFGAK CIIKCFCPNS
     KEPFECYNMS DIEAGLGLKR KHLIAISLLV GNDHDMNGVR GIGLDNALHF AKAFNEDDIL
     NRLQEIGKGD TSQIPSCTKF EDNIDVDGNC PNTKQPHCSL CGHPGSKKDH MKFSCESCVT
     KDDEGCQRKP EGFKCDCCSC VLNRRHKEQK REENRYSKIC HKIAEEPNFP KDEIIDMYLC
     NDNGYFSASD GPRIIWGKPN IEMLIDFLNF HQHWEPSYIR RTMFPMMSTI FLRDMSTPTG
     ETLLFGQYEF DSVERVKMRY GYQFYVVKWK RAGVNINTSK VPSNESSVQQ DVVELDEMVD
     LLDDAPEIHV DGCNFLFTDE NMDLVGTAFP AEVKSFLQEQ ERKRRKNSKS RCQENEKPAS
     PNSRSTQLSI TEFFPSTKIK HRQSKQREES SNDADSEGSK SSKMKRNMSN SDNLPKSVRR
     RLLFD
//
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