ID A0A0S3S6E3_PHAAN Unreviewed; 1337 AA.
AC A0A0S3S6E3;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE RecName: Full=Helicase ATP-binding domain-containing protein {ECO:0008006|Google:ProtNLM};
GN Name=Vigan.05G187500 {ECO:0000313|EMBL:BAT88395.1};
GN ORFNames=VIGAN_05187500 {ECO:0000313|EMBL:BAT88395.1};
OS Vigna angularis var. angularis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=157739 {ECO:0000313|EMBL:BAT88395.1, ECO:0000313|Proteomes:UP000291084};
RN [1] {ECO:0000313|EMBL:BAT88395.1, ECO:0000313|Proteomes:UP000291084}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shumari {ECO:0000313|Proteomes:UP000291084};
RX PubMed=26616024; DOI=10.1038/srep16780;
RA Sakai H., Naito K., Ogiso-Tanaka E., Takahashi Y., Iseki K., Muto C.,
RA Satou K., Teruya K., Shiroma A., Shimoji M., Hirano T., Itoh T., Kaga A.,
RA Tomooka N.;
RT "The power of single molecule real-time sequencing technology in the de
RT novo assembly of a eukaryotic genome.";
RL Sci. Rep. 5:16780-16780(2015).
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DR EMBL; AP015038; BAT88395.1; -; Genomic_DNA.
DR Proteomes; UP000291084; Chromosome 5.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR Gene3D; 1.10.3380.30; -; 2.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR025696; MTR4_beta-barrel.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR InterPro; IPR040801; Ski2_N.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF24; DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH11; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR Pfam; PF17911; Ski2_N; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000291084};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884}.
FT DOMAIN 358..513
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 628..826
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 29..48
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 140..174
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 561..582
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1337 AA; 150483 MW; EDFF079F79A965CA CRC64;
MDPIYAANEL AFRVGFSGHS GHLRLEPLTT PERHNPLRSI PDYIPPPAFP SETPESIKKY
IEETYLQPRL DPDEFSAEKV GRQWEFDWFD RAEVPLEPSL PRTMVIPVWE PPFRRSNNGS
VKGIWEPKFE EVDVSDLKLG ETESGPLPRT SGKDFVRGSI NNRPFRPGGL DDSRSVERVL
PEGASNGEWV REILNGGPAQ TIPPSLKQGL DFGELKSHPC SWNVCKEANP LQSSSVEKLS
ELSVQFDDLF KKAWEEDADG EQEQDEVESV ILEAEVGTAE VSSKPHDSET SLDDILSVDS
EGPELHLDGF SDEIEQMKKE AWAMHESSDR IVDCFHELVP DMALEFPFEL DAFQKEAIYY
LEKGESVFVA AHTSAGKTVV AEYAFALASK HCTRAVYTAP IKTISNQKYR DFCGKFDVGL
LTGDVSLRPE ASCLIMTTEI LRSMLYRGAD IIRDIEWVIF DEVHYVNDVD RGVVWEEVII
MLPRHINIVL LSATVPNTIE FADWIGRTKQ KEIRVTGTTK RPVPLEHCLY HSGELYKICE
SETFLPQGLK AAKEVSRKRN LTAGGASGPK VGISAGHENA RGSKRENISR MKQHGANFSG
TGRGYQNNSN GQSNWELRRA DASMWLMLIN KLSKKSLLPV VIFCFSKNRC DKSADSLTRT
DLTSSSEKSE IRLFCDKAFS RLKGSDKYLP QVVRVQNLLR RGIGVHHAGL LPIVKEVVEM
LFCRGVIKVL FSTETFAMGV NAPARTVVFD SLRKFDGKEF RQLLSGEYTQ MAGRAGRRGL
DKIGTVILIC RDELPEESDL KRVIVGSATR LESQFRLTYI MILHLLRVEE LKVEDMLKRS
FAEFHAQKKL PEMQQLLKRK LDQPRKAIEC IKGEPTIEEY YDLYSEAETY NNQISEAILQ
SPNAQQFLNR GRVVIVKSES AQDHLLGVVV KTPSPSNKTY IVFVIKPDMP SLMQSASSGA
MQNKSGSFDQ GYFVMPKSRR GLLDEYSTSV SARKGKGIIN ITMPYCGSAS GMGYEVREVD
SKEFLCICST KIKIDPVGLL EDVSSSVYSK TVQLLVDLKS DGNKYPPALD PVRDLKLRDV
KLVAKYQKWT RLLEKMSQNQ CHGCIKLEEH LKLAKEIKKH EEEVYALQFQ MSDEALKQMP
DFQGRIDVLK KIECIDEDLV VQMKGRVACE MNSGEELICT ECLFENQMDE LEPEEAVAIM
SAFVFQQRNT SEPSLTPKLA EAKQRLYKTA LRLGELQAQF NLPINPAEYA QENLKFGLVE
VVYEWAKGTP FAEICELTDV PEGLIVRTIV RLDETCREFK NAAAIMGNSA ICKKMEIASN
AIKRDIVFAA SLYITGV
//
