ID A0A0S9DW30_9MICO Unreviewed; 496 AA.
AC A0A0S9DW30;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE RecName: Full=HTH gntR-type domain-containing protein {ECO:0000259|PROSITE:PS50949};
GN ORFNames=ASF06_07820 {ECO:0000313|EMBL:KQO10109.1};
OS Agreia sp. Leaf244.
OC Bacteria; Actinomycetota; Actinomycetes; Micrococcales; Microbacteriaceae;
OC Agreia.
OX NCBI_TaxID=1736305 {ECO:0000313|EMBL:KQO10109.1, ECO:0000313|Proteomes:UP000051484};
RN [1] {ECO:0000313|EMBL:KQO10109.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf244 {ECO:0000313|EMBL:KQO10109.1};
RA Gilbert D.G.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:KQO10109.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf244 {ECO:0000313|EMBL:KQO10109.1};
RA Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQO10109.1}.
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DR EMBL; LMLX01000002; KQO10109.1; -; Genomic_DNA.
DR RefSeq; WP_055945345.1; NZ_LMLX01000002.1.
DR AlphaFoldDB; A0A0S9DW30; -.
DR STRING; 1736305.ASF06_07820; -.
DR OrthoDB; 8687362at2; -.
DR Proteomes; UP000051484; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd12913; PDC1_MCP_like; 1.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF5; GALACTONATE OPERON TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 22..92
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 496 AA; 52502 MW; C5B0F689908D9280 CRC64;
MSRSLGLTAE ARSAVFAPLA GPGRSEQVEQ RMREAIVLGL VGHGERLPRE TELARQFGVA
VSTVREALDA LRGQGLVRTT RGRDGGSFIT SSPEGQRELL AARLSRFSRA QLHDLALQLG
AISGSVAATA ATRATSSDLD SLRSIAESID FGDEVSARRG EALFRVEVAA AAQSPRLVAE
ELRLQAEFGP LLWFGMRDQA LRDTVRDAQL ALIDALARRD SARARAIVDE QLAALAAGAI
SISDEHAHAA STDAAPHAIL TPDDCASLVV ETLDTVFEAL GRARDAFATT LAGLAHPITR
AALDDSVRAL AEAELSAGAQ LVIGAGFVAT PGFVDDAAWH LAWWVRQAGD PLVQRLPPRQ
LAVVEDPESE FFRDYTRLEW WRGVASGEAS HVTGPYVDYL CTDEFILTLT MPVLDAAGAQ
PGVAGVDVTV SALEARFLPA FARLGERVTL VNAASRVVLS TDPTIAAGTL LPEVTALPGG
GERVACGTLP LALVRH
//
