ID A0A0T0M981_9FLAO Unreviewed; 632 AA.
AC A0A0T0M981;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|ARBA:ARBA00012895};
DE EC=5.6.2.2 {ECO:0000256|ARBA:ARBA00012895};
GN ORFNames=ASG21_10435 {ECO:0000313|EMBL:KQS92827.1};
OS Chryseobacterium sp. Leaf394.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae;
OC Chryseobacterium group; Chryseobacterium.
OX NCBI_TaxID=1736361 {ECO:0000313|EMBL:KQS92827.1, ECO:0000313|Proteomes:UP000051822};
RN [1] {ECO:0000313|EMBL:KQS92827.1, ECO:0000313|Proteomes:UP000051822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf394 {ECO:0000313|EMBL:KQS92827.1,
RC ECO:0000313|Proteomes:UP000051822};
RX PubMed=26633631; DOI=.1038/nature16192;
RA Bai Y., Muller D.B., Srinivas G., Garrido-Oter R., Potthoff E., Rott M.,
RA Dombrowski N., Munch P.C., Spaepen S., Remus-Emsermann M., Huttel B.,
RA McHardy A.C., Vorholt J.A., Schulze-Lefert P.;
RT "Functional overlap of the Arabidopsis leaf and root microbiota.";
RL Nature 528:364-369(2015).
RN [2] {ECO:0000313|Proteomes:UP000051822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf394 {ECO:0000313|Proteomes:UP000051822};
RA Garrido-Oter R., Mueller D.B.;
RL Submitted (OCT-2015) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000051822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Leaf394 {ECO:0000313|Proteomes:UP000051822};
RA Vorholt J.;
RT "Functional overlap of the Arabidopsis leaf and root microbiotas.";
RL Submitted (NOV-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP-dependent breakage, passage and rejoining of double-
CC stranded DNA.; EC=5.6.2.2; Evidence={ECO:0000256|ARBA:ARBA00000185};
CC -!- COFACTOR:
CC Name=Mg(2+); Xref=ChEBI:CHEBI:18420;
CC Evidence={ECO:0000256|ARBA:ARBA00001946};
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KQS92827.1}.
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DR EMBL; LMQH01000011; KQS92827.1; -; Genomic_DNA.
DR RefSeq; WP_056080892.1; NZ_LMQH01000011.1.
DR AlphaFoldDB; A0A0T0M981; -.
DR STRING; 1736361.ASG21_10435; -.
DR OrthoDB; 9802808at2; -.
DR Proteomes; UP000051822; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003918; F:DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; IEA:UniProtKB-EC.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006265; P:DNA topological change; IEA:InterPro.
DR CDD; cd01030; TOPRIM_TopoIIA_like; 1.
DR Gene3D; 3.30.230.10; -; 1.
DR Gene3D; 3.40.50.670; -; 1.
DR Gene3D; 3.30.565.10; Histidine kinase-like ATPase, C-terminal domain; 1.
DR InterPro; IPR003594; HATPase_C.
DR InterPro; IPR036890; HATPase_C_sf.
DR InterPro; IPR020568; Ribosomal_Su5_D2-typ_SF.
DR InterPro; IPR014721; Ribsml_uS5_D2-typ_fold_subgr.
DR InterPro; IPR001241; Topo_IIA.
DR InterPro; IPR013760; Topo_IIA-like_dom_sf.
DR InterPro; IPR000565; Topo_IIA_B.
DR InterPro; IPR013759; Topo_IIA_B_C.
DR InterPro; IPR013506; Topo_IIA_bsu_dom2.
DR InterPro; IPR018522; TopoIIA_CS.
DR InterPro; IPR006171; TOPRIM_domain.
DR PANTHER; PTHR45866; DNA GYRASE/TOPOISOMERASE SUBUNIT B; 1.
DR PANTHER; PTHR45866:SF2; DNA TOPOISOMERASE (ATP-HYDROLYZING); 1.
DR Pfam; PF00204; DNA_gyraseB; 1.
DR Pfam; PF02518; HATPase_c; 1.
DR Pfam; PF01751; Toprim; 1.
DR PRINTS; PR01159; DNAGYRASEB.
DR PRINTS; PR00418; TPI2FAMILY.
DR SMART; SM00387; HATPase_c; 1.
DR SMART; SM00433; TOP2c; 1.
DR SUPFAM; SSF55874; ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase; 1.
DR SUPFAM; SSF54211; Ribosomal protein S5 domain 2-like; 1.
DR SUPFAM; SSF56719; Type II DNA topoisomerase; 1.
DR PROSITE; PS00177; TOPOISOMERASE_II; 1.
DR PROSITE; PS50880; TOPRIM; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235, ECO:0000313|EMBL:KQS92827.1};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT DOMAIN 414..520
FT /note="Toprim"
FT /evidence="ECO:0000259|PROSITE:PS50880"
SQ SEQUENCE 632 AA; 72410 MW; 8EBC9C39FCB4A34E CRC64;
MSQDLQSNYN EGNIRTLEPR EHVRLRPGMY IGKLGDGSSV DDGIYILLKE VLDNSIDEFR
MKAGKRIDVK IKDGTVTVRD YGRGIPLGKI VDVVSIMNTG GKYDDGAFKK SIGLNGVGTK
AVNFLSTYFK VKSVREGKMR IAEFREGRLD ILHDEAETSE RNGTEITFLP DESIFINFKF
RNEYVAKMLR NYTYLNLGLK IYFNGEVYES QNGLKDLLEE EIDGEIVYPI IHIKDEDMEL
AITHSDKSQS ETYFSFVNGQ YTSQGGTHLN AFKEAYVKTI REFFNKNFEA TDIRKAIIGA
VYINVGNPVF ESQTKTKLGS ATMGQDKDGK ELETIKTFVI NYLKNKLDNY LHKNPEIAEA
LQRKILISER ERKELSGIQK LARERAKKVS LHNKKLRDCR QHYNDQKAER KAETQIFITE
GDSASGSITK SRDVETQAVF SLKGKPLNCY GLTKKVVYEN EEFNLLQAAL NIEESLEDLR
YNQVIIATDA DVDGMHIRLL MITFFLQFFP DVIKNGHLYI LQTPLFRVRN KKETRYCYSE
LERVKALNEL GKNPEITRFK GLGEISPDEF KNFIGKDIRL EPVVLGKDQT IDQLLEFYMG
KNTPDRQTFI LENLVVEDDS EIDKKEIISE AI
//
