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Database: UniProt
Entry: A0A0U3DT98_9EURY
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ID   A0A0U3DT98_9EURY        Unreviewed;       496 AA.
AC   A0A0U3DT98;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   24-JAN-2024, entry version 29.
DE   RecName: Full=DNA-directed RNA polymerase subunit Rpo1C {ECO:0000256|HAMAP-Rule:MF_00411};
DE            EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};
DE   AltName: Full=DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411};
GN   Name=rpoA2 {ECO:0000256|HAMAP-Rule:MF_00411,
GN   ECO:0000313|EMBL:ALT69625.1};
GN   Synonyms=rpo1C {ECO:0000256|HAMAP-Rule:MF_00411};
GN   ORFNames=sm9_1859 {ECO:0000313|EMBL:ALT69625.1};
OS   Methanobrevibacter millerae.
OC   Archaea; Euryarchaeota; Methanomada group; Methanobacteria;
OC   Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.
OX   NCBI_TaxID=230361 {ECO:0000313|EMBL:ALT69625.1, ECO:0000313|Proteomes:UP000067738};
RN   [1] {ECO:0000313|EMBL:ALT69625.1, ECO:0000313|Proteomes:UP000067738}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SM9 {ECO:0000313|EMBL:ALT69625.1,
RC   ECO:0000313|Proteomes:UP000067738};
RA   Leahy S.C., Kelly W.J., Pacheco D.M., Li D., Altermann E., Attwood G.T.;
RT   "The complete genome sequence of the rumen methanogen Methanobrevibacter
RT   millerae SM9.";
RL   Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: DNA-dependent RNA polymerase (RNAP) catalyzes the
CC       transcription of DNA into RNA using the four ribonucleoside
CC       triphosphates as substrates. Forms part of the jaw domain.
CC       {ECO:0000256|HAMAP-Rule:MF_00411}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=a ribonucleoside 5'-triphosphate + RNA(n) = diphosphate +
CC         RNA(n+1); Xref=Rhea:RHEA:21248, Rhea:RHEA-COMP:14527, Rhea:RHEA-
CC         COMP:17342, ChEBI:CHEBI:33019, ChEBI:CHEBI:61557, ChEBI:CHEBI:140395;
CC         EC=2.7.7.6; Evidence={ECO:0000256|ARBA:ARBA00024550,
CC         ECO:0000256|HAMAP-Rule:MF_00411};
CC   -!- SUBUNIT: Part of the RNA polymerase complex. {ECO:0000256|HAMAP-
CC       Rule:MF_00411}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00411}.
CC   -!- SIMILARITY: Belongs to the RNA polymerase beta' chain family.
CC       {ECO:0000256|HAMAP-Rule:MF_00411}.
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DR   EMBL; CP011266; ALT69625.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0U3DT98; -.
DR   KEGG; mmil:sm9_1859; -.
DR   PATRIC; fig|230361.4.peg.1922; -.
DR   Proteomes; UP000067738; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006351; P:DNA-templated transcription; IEA:UniProtKB-UniRule.
DR   CDD; cd06528; RNAP_A; 1.
DR   Gene3D; 1.10.150.390; -; 1.
DR   HAMAP; MF_00411; RNApol_arch_Rpo1C; 1.
DR   InterPro; IPR045867; DNA-dir_RpoC_beta_prime.
DR   InterPro; IPR007081; RNA_pol_Rpb1_5.
DR   InterPro; IPR012757; RPO1C.
DR   NCBIfam; TIGR02389; RNA_pol_rpoA2; 1.
DR   PANTHER; PTHR19376; DNA-DIRECTED RNA POLYMERASE; 1.
DR   PANTHER; PTHR19376:SF32; DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1; 1.
DR   Pfam; PF04998; RNA_pol_Rpb1_5; 1.
DR   SUPFAM; SSF64484; beta and beta-prime subunits of DNA dependent RNA-polymerase; 1.
PE   3: Inferred from homology;
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00411};
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|HAMAP-
KW   Rule:MF_00411};
KW   DNA-directed RNA polymerase {ECO:0000256|HAMAP-Rule:MF_00411,
KW   ECO:0000313|EMBL:ALT69625.1};
KW   Nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00411};
KW   Transcription {ECO:0000256|HAMAP-Rule:MF_00411};
KW   Transferase {ECO:0000256|HAMAP-Rule:MF_00411}.
FT   DOMAIN          71..442
FT                   /note="RNA polymerase Rpb1"
FT                   /evidence="ECO:0000259|Pfam:PF04998"
SQ   SEQUENCE   496 AA;  56069 MW;  EE86A63F6CBA75F1 CRC64;
     MDELIEKVQN TLEERNICIP ENYDIKNILV DYDSIDVTDE VFEEIIAKLK NINLICNLLN
     QFNMDFVEFS QTLEENDIEL LDYYYIKNIF SKFNTNQLSE EDLDSVIGQI SVIDKVLNVL
     FDKGIEFPKG YVEDLANAYT RRDLTDDELD KLVDKLKTAY DRAHVEAGEA VGTVAAQSVG
     EPGTQMTMRT FHYAGVTELN VTLGLPRLIE IVDARKDIAT PTMDIYFEED KRYDEEFVKT
     LANKIGKSTI NDILDDFNLN YAEMQVEATL SDKKIDERRL VKEDIIQKIE ADFKKEKPEI
     NGNLIIIKPK QDGDDRHRIR NLRLLADKVR DLQISGVKKI GKVIIRKDEE WVIHTEGSNL
     KEILSFDGID ARRTTTNSIR EIEDVLGIEA ARQSIINEAN NTLSEQGLTV DVRHIMLVAD
     IMTSEGEVKS IGRHGISGEK SSVLARAAFE ETGKHLLNAS IRGEVDDLTG IIENIIIGQP
     IPLGTGSIGV KMAKNE
//
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