ID A0A0U3MUE3_9BURK Unreviewed; 237 AA.
AC A0A0U3MUE3;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=Flagellar biosynthesis sigma factor {ECO:0000313|EMBL:ALV07978.1};
DE SubName: Full=RNA polymerase sigma-28 (SigD/FliA/WhiG) subunit {ECO:0000313|EMBL:REG21803.1};
GN ORFNames=DES44_0931 {ECO:0000313|EMBL:REG21803.1}, RD2015_3521
GN {ECO:0000313|EMBL:ALV07978.1};
OS Roseateles depolymerans.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Sphaerotilaceae; Roseateles.
OX NCBI_TaxID=76731 {ECO:0000313|EMBL:ALV07978.1, ECO:0000313|Proteomes:UP000060699};
RN [1] {ECO:0000313|EMBL:ALV07978.1, ECO:0000313|Proteomes:UP000060699}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KCTC 42856 {ECO:0000313|EMBL:ALV07978.1,
RC ECO:0000313|Proteomes:UP000060699};
RA Kim K.M.;
RT "Complete genome of Roseateles depolymerans KCTC 42856.";
RL Submitted (DEC-2015) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:REG21803.1, ECO:0000313|Proteomes:UP000256283}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 11813 {ECO:0000313|EMBL:REG21803.1,
RC ECO:0000313|Proteomes:UP000256283};
RA Goeker M.;
RT "Genomic Encyclopedia of Type Strains, Phase IV (KMG-IV): sequencing the
RT most valuable type-strain genomes for metagenomic binning, comparative
RT biology and taxonomic classification.";
RL Submitted (AUG-2018) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP013729; ALV07978.1; -; Genomic_DNA.
DR EMBL; QUMT01000001; REG21803.1; -; Genomic_DNA.
DR RefSeq; WP_058936014.1; NZ_QUMT01000001.1.
DR AlphaFoldDB; A0A0U3MUE3; -.
DR STRING; 76731.RD2015_3521; -.
DR KEGG; rdp:RD2015_3521; -.
DR PATRIC; fig|76731.3.peg.3608; -.
DR OrthoDB; 9799825at2; -.
DR Proteomes; UP000060699; Chromosome.
DR Proteomes; UP000256283; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003899; F:DNA-directed 5'-3' RNA polymerase activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR CDD; cd06171; Sigma70_r4; 1.
DR Gene3D; 1.10.1740.10; -; 1.
DR Gene3D; 1.20.140.160; -; 1.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR012845; RNA_pol_sigma_FliA_WhiG.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR NCBIfam; TIGR02479; FliA_WhiG; 1.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30385:SF7; RNA POLYMERASE SIGMA FACTOR FLIA; 1.
DR PANTHER; PTHR30385; SIGMA FACTOR F FLAGELLAR; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 2.
PE 4: Predicted;
KW Cell projection {ECO:0000313|EMBL:ALV07978.1};
KW Cilium {ECO:0000313|EMBL:ALV07978.1};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Flagellum {ECO:0000313|EMBL:ALV07978.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000060699};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 26..96
FT /note="RNA polymerase sigma-70 region 2"
FT /evidence="ECO:0000259|Pfam:PF04542"
FT DOMAIN 183..232
FT /note="RNA polymerase sigma-70 region 4"
FT /evidence="ECO:0000259|Pfam:PF04545"
SQ SEQUENCE 237 AA; 26676 MW; C176987A2B3581D8 CRC64;
MQHAYAEWGA VASAGLSAEI EQRALREYAP LVKRVVRQLS AQASAVMDRE DMEQIGLMGL
LEALRRYGPP DAGFGSFAAL RVRGAILDEL RRQDWRPRTV RQDSHKQRDA LRALTRTLGR
EPTEAEILQH LKLSPQAYQE FLQAEVAEEL ASFDELVEDL AQLPSEQRSP EAQLMVTRSI
AQALSALNER EQKVIQLYYE FDASLKEIAA VLDLTEARVS QINKAALAKM RAHLQRG
//
