ID A0A0V0SNS5_9BILA Unreviewed; 1191 AA.
AC A0A0V0SNS5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 30.
DE SubName: Full=Cytochrome b-c1 complex subunit Rieske, mitochondrial {ECO:0000313|EMBL:KRX28198.1};
GN Name=SYP {ECO:0000313|EMBL:KRX28198.1};
GN ORFNames=T07_2837 {ECO:0000313|EMBL:KRX28198.1};
OS Trichinella nelsoni.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=6336 {ECO:0000313|EMBL:KRX28198.1, ECO:0000313|Proteomes:UP000054630};
RN [1] {ECO:0000313|EMBL:KRX28198.1, ECO:0000313|Proteomes:UP000054630}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS37 {ECO:0000313|EMBL:KRX28198.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=[2Fe-2S] cluster; Xref=ChEBI:CHEBI:190135;
CC Evidence={ECO:0000256|ARBA:ARBA00034078};
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004167}; Single-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004167}.
CC -!- SIMILARITY: Belongs to the ELL/occludin family. {ECO:0000256|PROSITE-
CC ProRule:PRU01324}.
CC -!- SIMILARITY: Belongs to the Rieske iron-sulfur protein family.
CC {ECO:0000256|ARBA:ARBA00010651}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX28198.1}.
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DR EMBL; JYDL01000001; KRX28198.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0SNS5; -.
DR Proteomes; UP000054630; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProt.
DR GO; GO:0005666; C:RNA polymerase III complex; IEA:InterPro.
DR GO; GO:0008023; C:transcription elongation factor complex; IEA:InterPro.
DR GO; GO:0051537; F:2 iron, 2 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0008121; F:ubiquinol-cytochrome-c reductase activity; IEA:InterPro.
DR GO; GO:0006383; P:transcription by RNA polymerase III; IEA:InterPro.
DR GO; GO:0006368; P:transcription elongation by RNA polymerase II; IEA:InterPro.
DR CDD; cd03470; Rieske_cytochrome_bc1; 1.
DR Gene3D; 6.10.140.340; -; 1.
DR Gene3D; 1.10.10.2670; E3 ubiquitin-protein ligase; 1.
DR Gene3D; 2.102.10.10; Rieske [2Fe-2S] iron-sulphur domain; 1.
DR Gene3D; 1.20.5.270; Ubiquinol cytochrome reductase, transmembrane domain; 1.
DR InterPro; IPR037008; bc1_Rieske_TM_sf.
DR InterPro; IPR042065; E3_ELL-like.
DR InterPro; IPR019464; ELL_N.
DR InterPro; IPR010844; Occludin_ELL.
DR InterPro; IPR017941; Rieske_2Fe-2S.
DR InterPro; IPR036922; Rieske_2Fe-2S_sf.
DR InterPro; IPR014349; Rieske_Fe-S_prot.
DR InterPro; IPR005805; Rieske_Fe-S_prot_C.
DR InterPro; IPR004192; Rieske_TM.
DR InterPro; IPR007811; RPC4.
DR InterPro; IPR006317; Ubiquinol_cyt_c_Rdtase_Fe-S-su.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR NCBIfam; TIGR01416; Rieske_proteo; 1.
DR PANTHER; PTHR10134; CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL; 1.
DR PANTHER; PTHR10134:SF20; CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF10390; ELL; 1.
DR Pfam; PF07303; Occludin_ELL; 1.
DR Pfam; PF00355; Rieske; 1.
DR Pfam; PF05132; RNA_pol_Rpc4; 1.
DR Pfam; PF02921; UCR_TM; 1.
DR PRINTS; PR00162; RIESKE.
DR SUPFAM; SSF50022; ISP domain; 1.
DR SUPFAM; SSF81502; ISP transmembrane anchor; 1.
DR SUPFAM; SSF144292; occludin/ELL-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51980; OCEL; 1.
DR PROSITE; PS51296; RIESKE; 1.
PE 3: Inferred from homology;
KW 2Fe-2S {ECO:0000256|ARBA:ARBA00022714};
KW Disulfide bond {ECO:0000256|ARBA:ARBA00023157};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000054630};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989}.
FT DOMAIN 497..606
FT /note="OCEL"
FT /evidence="ECO:0000259|PROSITE:PS51980"
FT DOMAIN 1116..1184
FT /note="Rieske"
FT /evidence="ECO:0000259|PROSITE:PS51296"
FT REGION 168..217
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 364..493
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 608..640
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 370..392
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 393..448
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 472..493
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1191 AA; 133328 MW; FCB30A4DE684DDE8 CRC64;
MTAASSEIFP LAQRDVNLPQ LTAFIIKLTD SSLQSLQDSV RTCNGYAGSS SKFGSIEFQP
DDCRISFGPD AQAFKFTLSK VQDASSKGPQ DAIEQCRDGS EWIKLGAVRH RIKVLATDDS
YHNIKKKALR AEEEAKKSAL KVLKQPKEGV SKASEKIWNK VQDAMNASSK KGSVTSASSS
FQSSGSSQLV SPPRSNGHQR HQLSSSTSSS LPTKSRFDIT KKSVRERIIH HLIIRPSTAN
GMLNRLLKEG LSDVDRQQFE ATFNSVAQVR GGKSQSSTAG SGCVYDLQPQ CFSEVSCDWP
FYTNYERQLV RRELNNGAQS SRGRNAYVID DIIPKKESSR VRPVTGSSSS SKLAKAKAAA
VSASSAGVEH SLQEHHHQSC RDLDKEKSTP NKQRSVISDV SSSARIPPKE QSFSAGKKTT
NGYPELTTHH RQANPHSAST TLQSRKRPAD VDSQMPKSKK PPPIEQHVAV TSNGYGHCSS
EMGVSNHDSN GSPPSNCSFW KDFPSIDSDE QRRRYKQAFD NDYPEYISCY EQLNQFYEEI
AIMVNQLKQY DKNSDEYSQL ERDICSKYHR WEEDKTIDEV RNRHYQLRLK LAVLKARVQD
YDDRKAIPMA SRPPRLPLPG SSRGVAPRLP NSMPTRARPL PNLAKAGQRQ TPNVAQSLAA
LPDNPRGSAR GGSRFRGNMK SRLMTSEGIF SEGFTNELEM KSASDVDHYG EVVVEESFKK
EIPDETDEEA LEKLFYKENS EKLPTNFVTL LSENSISEEQ QKKQAVRNVF FADQNCSPVF
VQLPCAIANV AQRMLDCVPL KEDNANSVEN DLEKGRETHV LEKFPEGHLG KLQLHKSGKV
TLKLNSAHSL PLLMPVQINS DNFVEKLVCL HLNDNEPNGG TMDWLGTVKS RWIFRIQPEF
FLHTESVKPL LLSFMQVAMK VVDFSRMNIS KKLLYGITGN ARNVELRKSG CVYGLNFSPA
RFNNRNVMSK FTAYQSVFVK GLFTGSSQRY AHTDVTFPDF DEYRRDSTKD IKLRNEDTDV
PRKMFSYLSL GVGTAATLYC TKTVALQVIS YKGPPFSEEA GAVTEINLNL VPEGKNSTFL
WRGKPVFVRH RTAKEINVES QVDISKLRDP EHDHQRVQKP EWLIVLAPCT HLGCVPIPYA
GDYKGYFCPC HGSHYDASGR IRRGPAPRNL EVPHYVFKDE NTVLIGKTHI A
//
