ID A0A0V0TRX4_9BILA Unreviewed; 1503 AA.
AC A0A0V0TRX4;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 27-MAR-2024, entry version 24.
DE SubName: Full=Protein lap1 {ECO:0000313|EMBL:KRX41730.1};
DE Flags: Fragment;
GN Name=let-413 {ECO:0000313|EMBL:KRX41730.1};
GN ORFNames=T05_16162 {ECO:0000313|EMBL:KRX41730.1};
OS Trichinella murrelli.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=144512 {ECO:0000313|EMBL:KRX41730.1, ECO:0000313|Proteomes:UP000055048};
RN [1] {ECO:0000313|EMBL:KRX41730.1, ECO:0000313|Proteomes:UP000055048}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS417 {ECO:0000313|EMBL:KRX41730.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|ARBA:ARBA00004496}.
CC Membrane {ECO:0000256|ARBA:ARBA00004170}; Peripheral membrane protein
CC {ECO:0000256|ARBA:ARBA00004170}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX41730.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; JYDJ01000163; KRX41730.1; -; Genomic_DNA.
DR STRING; 144512.A0A0V0TRX4; -.
DR Proteomes; UP000055048; Unassembled WGS sequence.
DR CDD; cd00992; PDZ_signaling; 4.
DR Gene3D; 2.30.42.10; -; 4.
DR Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR InterPro; IPR001611; Leu-rich_rpt.
DR InterPro; IPR003591; Leu-rich_rpt_typical-subtyp.
DR InterPro; IPR032675; LRR_dom_sf.
DR InterPro; IPR001478; PDZ.
DR InterPro; IPR036034; PDZ_sf.
DR PANTHER; PTHR23119; DISCS LARGE; 1.
DR PANTHER; PTHR23119:SF44; PROTEIN SCRIBBLE HOMOLOG; 1.
DR Pfam; PF13855; LRR_8; 3.
DR Pfam; PF00595; PDZ; 4.
DR SMART; SM00364; LRR_BAC; 11.
DR SMART; SM00365; LRR_SD22; 5.
DR SMART; SM00369; LRR_TYP; 13.
DR SMART; SM00228; PDZ; 4.
DR SUPFAM; SSF52058; L domain-like; 2.
DR SUPFAM; SSF50156; PDZ domain-like; 4.
DR PROSITE; PS51450; LRR; 4.
DR PROSITE; PS50106; PDZ; 4.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Leucine-rich repeat {ECO:0000256|ARBA:ARBA00022614};
KW Reference proteome {ECO:0000313|Proteomes:UP000055048};
KW Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT DOMAIN 637..724
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 758..847
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 906..996
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT DOMAIN 1003..1090
FT /note="PDZ"
FT /evidence="ECO:0000259|PROSITE:PS50106"
FT REGION 455..571
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 583..608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 851..898
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1159..1243
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1319..1338
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 1353..1383
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 455..517
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 555..571
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 851..897
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1214..1228
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1321..1336
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:KRX41730.1"
SQ SEQUENCE 1503 AA; 163277 MW; 08B735D07FFEE6AD CRC64;
LFNRHVELLD KRQCNLNHVP EEVVRYTRSL EVLLLDSNHI KEISKHVFRL HKLRRLALSD
NEIYKVPADI SNLSELEDLD LSKNDIQEIP DSIKQCRNLL YVDLSSNPIN RLPECVFQLG
RLTSLGLNDI SMTNLPTDIG KLTNLEALEA RENLLRSLPA SIEQLKNLKR LDIGSNEFET
LPLEIGQLEN LQELYVDCND LECLPKEITF LKKLQSLDVS ENKILSFPDD MGELVSLSDL
TASQNCVEVL PHSIGRLKKL TILKIDKNRL VALTPAIGSC TSLCELVLTE NLLTELPSSL
GNLKKLTVFN VDRNRLSELP STIGSCSNLT VLSLRNNLLS ILPFEIGKLQ QLRVLDVSGN
RLRSLPYTLN ALSNLQAIWL SDNQSQPLLK LQADQDSRTG VKVLTCYLLP QRDANLAGDT
KGETVVENGF VGGPKVHFPD VDGDSVDEDD EAIGKFERHD TPHPKHPTKA KGRQIDGHVI
PHDGNNKPGK DATFRVGDGR RKSAGEDSVE DGRTSVARSP TEKQSCSEVQ SPASDDDKRP
AVPPPVPPRT VSRASAERLE SSSPRNEEIQ QTWEKTVSFA QNEDNADEEV VQSRLKRKNT
PHPLKSSVLD RNSGEAQAKV AGYLISSRAS STEQRLSLTI RRTDQGLGLS IAGGLGSTPY
KQDDNSIFIS KIIDGGAADL AGLRVGDKLL SVNGRSVVNI EHKQAVEVMK LAGAVVRLGI
LREGDPCPPA SSVKRSSPSP VELLPSVVDS NKEMESVSTT IKRDSTGLGF SVAGGRGSSS
VGKTADECIF ISRITPGGAA DRDGKLRVGD RVLSINGVNM INARHDQAVY LLTGSSNEVL
LVVQREKANN PCSVSSSPAA TAPAQALPSM LSTDRRMAPS SHQPHTNTTT AGSSSVEPIR
ENEIEEVCVI KTGNALGLSI VGGTDHSCHP FGGSEPGVFI SKVVPDGPAG KTGKLRLGDR
LLAVNGKDVT MATHHETVAF LMAATSEVKL KVRHDPLPPS LREFTLTRLG DESLGMEVSG
GVNSSVHPFD PLDEGIFISK IHPGGAVAKD GRLTVGTRIL EVNNKSFLGI TLQQAAEILA
SAGSHLHVTV CDGLNPVHFA DSFSAPSSTK EEVSDFVHGK KEKKKVFTFS FICVQVNLSP
VVSTVPRKII SASVYEERSV AENNDDTAQS MTKSMEMPPP VAPKPNIKLI KPGSLPVHDD
GSSGILWNEK HRSPSKIPTP SPSNGPNGRE RRLRSPPDGL QPEKLPFVKK LQKFEHEIEQ
QQGDVAACRS ATTADIVDCY SVAGQQPPPL TRGAATHHSV PKTVRTKKAE ARMLLLANSP
SPASELDQNQ SLSPAEQRAL EAEKRAAWRK ARLKSLEADA AKAEKVMERV RQMTDSNENL
EQKDKGLVAV LDANAFNAAA DSANTMQSGD GDGMADCHET VNHVGDQLIR EVLEEVDPES
GDRVVKTVER RQVIVQRRQV ETTETKLLSS SSALESQEPI TFIDDLTTAN NNNNNNNITS
NKD
//
