ID   A0A0V0W334_9BILA        Unreviewed;       425 AA.
AC   A0A0V0W334;
DT   16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT   16-MAR-2016, sequence version 1.
DT   27-MAR-2024, entry version 16.
DE   SubName: Full=Retrovirus-related Pol polyprotein from transposon 17.6 {ECO:0000313|EMBL:KRX70196.1};
GN   Name=pol {ECO:0000313|EMBL:KRX70196.1};
GN   ORFNames=T06_12054 {ECO:0000313|EMBL:KRX70196.1};
OS   Trichinella sp. T6.
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC   Trichinellida; Trichinellidae; Trichinella.
OX   NCBI_TaxID=92179 {ECO:0000313|EMBL:KRX70196.1, ECO:0000313|Proteomes:UP000054673};
RN   [1] {ECO:0000313|EMBL:KRX70196.1, ECO:0000313|Proteomes:UP000054673}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ISS34 {ECO:0000313|EMBL:KRX70196.1};
RA   Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT   "Evolution of Trichinella species and genotypes.";
RL   Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:KRX70196.1}.
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DR   EMBL; JYDK01000299; KRX70196.1; -; Genomic_DNA.
DR   AlphaFoldDB; A0A0V0W334; -.
DR   STRING; 92179.A0A0V0W334; -.
DR   Proteomes; UP000054673; Unassembled WGS sequence.
DR   CDD; cd01647; RT_LTR; 1.
DR   Gene3D; 3.10.20.370; -; 1.
DR   Gene3D; 3.30.70.270; -; 2.
DR   Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR   InterPro; IPR043502; DNA/RNA_pol_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   InterPro; IPR000477; RT_dom.
DR   InterPro; IPR041577; RT_RNaseH_2.
DR   PANTHER; PTHR37984:SF7; INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR37984; PROTEIN CBG26694; 1.
DR   Pfam; PF17919; RT_RNaseH_2; 1.
DR   Pfam; PF00078; RVT_1; 1.
DR   SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR   PROSITE; PS50878; RT_POL; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000054673}.
FT   DOMAIN          129..319
FT                   /note="Reverse transcriptase"
FT                   /evidence="ECO:0000259|PROSITE:PS50878"
SQ   SEQUENCE   425 AA;  47916 MW;  E1F69CC311CE3206 CRC64;
     MRYHGCTPDP TAGCLRMRQG NIPFRKSHAV ALVRVESPQS EFMTHHPAQE AMEKMLPSEQ
     ESSGKHRSAL AAILKEFADV LSTSDEDLGR TSLVRHAIHT GDAKPVRCSP GRIPYHQRAQ
     VESLLDEMLR QDVVEPSSSP WASPIVLVRK KDGSCRFCVD YRQLNNLTRK DAHPLPRIDD
     TLDALAGAQW FSTLDLASGY WQVEVEPQDR EKTAFTTPLG LYQFKVMPFG LCNAPATFQR
     LMEIALRGLV GSDCLVYLDD VIVFGKTAEE HTARLREVFR RLREVGLKSC DSCWGWRLTT
     ASSSTALRTS PPRYTGCLKM RPSGQIGRMV NWSKACQSAF DELKYHLTSA LVLAYPDFHR
     QFIVDVVASG DGLGAVLSQR EEKAERVLAY ASRTLTKAER RYCATRREML GLVWALREFR
     PYLYG
//