ID A0A0V0WER5_9BILA Unreviewed; 1230 AA.
AC A0A0V0WER5;
DT 16-MAR-2016, integrated into UniProtKB/TrEMBL.
DT 16-MAR-2016, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=ARID domain-containing protein C08B11.3 {ECO:0000313|EMBL:KRX74176.1};
GN Name=C08B11.3 {ECO:0000313|EMBL:KRX74176.1};
GN ORFNames=T06_13874 {ECO:0000313|EMBL:KRX74176.1};
OS Trichinella sp. T6.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia;
OC Trichinellida; Trichinellidae; Trichinella.
OX NCBI_TaxID=92179 {ECO:0000313|EMBL:KRX74176.1, ECO:0000313|Proteomes:UP000054673};
RN [1] {ECO:0000313|EMBL:KRX74176.1, ECO:0000313|Proteomes:UP000054673}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ISS34 {ECO:0000313|EMBL:KRX74176.1};
RA Korhonen P.K., Edoardo P., Giuseppe L.R., Gasser R.B.;
RT "Evolution of Trichinella species and genotypes.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:KRX74176.1}.
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DR EMBL; JYDK01000153; KRX74176.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0V0WER5; -.
DR STRING; 92179.A0A0V0WER5; -.
DR Proteomes; UP000054673; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd16100; ARID; 1.
DR Gene3D; 1.10.150.60; ARID DNA-binding domain; 1.
DR Gene3D; 3.30.160.60; Classic Zinc Finger; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR003150; DNA-bd_RFX.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR013087; Znf_C2H2_type.
DR PANTHER; PTHR22970; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2; 1.
DR PANTHER; PTHR22970:SF14; AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF02257; RFX_DNA_binding; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00355; ZnF_C2H2; 2.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51526; RFX_DBD; 1.
DR PROSITE; PS00028; ZINC_FINGER_C2H2_1; 2.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000054673}.
FT DOMAIN 19..111
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 612..689
FT /note="RFX-type winged-helix"
FT /evidence="ECO:0000259|PROSITE:PS51526"
FT REGION 501..520
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 716..743
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 771..810
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 889..908
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 913..932
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 998..1030
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 825..852
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 725..743
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 772..810
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1230 AA; 135301 MW; 4078B0D5C206A0D1 CRC64;
MSDIINYNEL FYDDDEHLYK QRKAFNAQLQ SFLCRKAGGP HTVPMINGRP IDLFALYRQV
TQLGGWSKVS THNKWHEVLS SVQLGDDCVG ADYALRMIYM RYLARFEQKF TFGTDTDDED
DSSYSRSRSK VSSSYGFNSR YYDNSITNVG AKYQANCLPT AVNFVRSLES GLPNEVDFAV
NTLMLISFGG GVTAEDINLR QLTSLLLAHV GIFEEGPGSY RAVYFGQWLK YTNRRFVEFW
NEHVLDDKVR QLLGPDEAAV VGEWEISYSD QDQIKREIMK RIQQVFCILR NFSMQRNCVQ
VLASCKALVT LILVGIHSDL CQLVSYASDL MAFMATTWRL DSIETPTTQL LFSCIYSGLQ
SKDRMRLSRQ IEVVGHLCSC AENKQVMLEF VDSDVIRCIV NGLLVKDVLI CLNTLECMLS
LSQMGEAVCD LIVQQPSAIA TLVDLVTVEA STYAPAGLVG LQIVEMAKRH QHVNAAPPPG
QPYRSDMAPR FGQVQNARWS RPITPSPLAT QSAGSSSGSI RTSAINCTTV RLPNARYQSV
PSTSTTVIYS QQQQQQQQQQ IQQQQSQPVV VQTNIRQLTA SPMLQHRSMP RPEIFKGPAV
SVYQDQQVEA VALKWIKENC VADSNSIVSR GELYAAYARA VHGRQTLVVS ASTFSNLIRQ
LFPLCVQRQL EGPNSKSGLL QIEGIRFVGS QRNHVTSPTP VAAQHPIMQQ MLCRNNKPSS
VEPKRPDSVG TTDSYSLPNT PDSFASSSGC SQDVNIAATA AVPAVNVKKK QQPCCRTGSS
SSGSRLSSSG GGGGAVSLNG STVSSSQPAT SGQCQLEVCH PALEATSLIE ANDAHEARIV
RVENKAAAAR STGAVYSKAV NANGDLSEGE NSTVSSLAAA AADPAEVQLP WHGADDPLPP
EQQRRRFDED RHMLNGTDAD GNRRAATPDT DTVKQNVPLG QKNLHVLLNK PDTVGAVWVP
VNGGGVSRKR TNSDDADHHC SSLQVVDTRK RQIICTSNPA ARQATSSPSV VQAQRPLAAT
SPSVRLSQRQ TPPPLMAANA ALRYVCEWNQ CKQLFQSAQG VNIHVYKSHI SGGSQKCMWA
NCDDTVRKKW SLVAHVQEVH CNEQVLRAAA MRRAELLLTG RSKIPEPRAP PHPGYAPDAA
MSAIRRHTLV NMPKDLPEEN EGPVTKSIRF TSALVLRNLA MNSENARRKI LFFENRLVHM
AFSRTECNRA LAQCLGALRP ELLSEDDSEK
//
